fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12480.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm016746 not found in 292aa AT3G12480.1 1st_1st 0.476673427 Ia
Gm036476 not found in 287aa AT3G12480.1 not_1st 0.474645030 II
Gm042940 not found in 299aa AT3G12480.1 not_1st 0.462474645 II
Gm036478 not found in 141aa AT3G12480.1 not_1st 0.427991886 II
Gm036477 not found in 141aa AT3G12480.1 not_1st 0.427991886 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G12480.1     MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAK
gm042940_Glyma1 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
gm016746_Glyma0 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEVTLQRGAK
gm036476_Glyma1 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
gm036477_Glyma1 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
gm036478_Glyma1 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAK
                *************************************:**************:**:****

AT3G12480.1     TVSSLHLKHCVERYNVFDFLREVVSKVPDYGHSQGQGHGDVTMDDRSISKRRKPISDEVN
gm042940_Glyma1 TMNSLHLKHCVQSYNVFDFLRDVVSRVPDY--GHGHGHAEAGPDDRVITKRRKAIGDDGN
gm016746_Glyma0 TMNSLHLKHCVQSYSVFDFLRDIVSRVPDYGHGHGHGHSEAGADDRALPKRRKAVGDDGN
gm036476_Glyma1 TMNSLHLKHCVQSYNVFDFLRDVVSRVPDY--SHGHGHAEAGPDDRAIAKRRKAVGDDGN
gm036477_Glyma1 TMNSLHLKHCVQSYNVFDFLRDVVSRVPDY--SHGHGHAEAGPDDRAIAKRRKAVGDDGN
gm036478_Glyma1 TMNSLHLKHCVQSYNVFDFLRDVVSRVPDY--SHGHGHAEAGPDDRAIAKRRKAVGDDGN
                *:.********: *.******::**:****  .:*:**.:.  *** :.****.:.*: *

AT3G12480.1     DSDEEYKKSKTQEIGSAKTSGRGGRGRGRGRGRGGRAAKAAEREGLNREMEVEAANSGQP
gm042940_Glyma1 DSDEEAKRSKMLELGHTGSTGR-GRGRGRGRGR-GRGRPPLNRETYHQDAESEPCTSVQP
gm016746_Glyma0 DSDEEAKRSKMRELGHTGTPGR-GRGRGRGRGR-GRGARTIERDICHQQVESEPCTSILQ
gm036476_Glyma1 DSDEEAKRSKMHELGHTGSTGR-GRGRGRGRGR-GRGRPPLNREIYHQDAESEPCTSVQP
gm036477_Glyma1 DSDEEAKRSKMV------------------------------------------------
gm036478_Glyma1 DSDEEAKRSKMV------------------------------------------------
                ***** *:**                                                  

AT3G12480.1     PPEDNVKMHASESSPQEDEKKGIDGTAASNEDTKQH--------LQSPKEGIDFDLNAES
gm042940_Glyma1 SNPQNTNTSIA-----------MDNGSESKEIPKEENIAAPVVPVVSTDSLRNIDLNA-I
gm016746_Glyma0 SSNDIPNTSVP-----------IDNGPQSKELPKEN----FVISEESTQSFRNIDLNA-N
gm036476_Glyma1 SNPQNTNTSVA-----------MDSGSESKEIPKEQNIA---VPVESTDSLRNIDLNA-I
gm036477_Glyma1 -------------------------------------IAFF-------------------
gm036478_Glyma1 -------------------------------------IAFF-------------------
                                                                            

AT3G12480.1     LDLNETKLA-------------PATGTTTTT--TA-ATDSEEYSGWPMMDISKM--DPAQ
gm042940_Glyma1 TNENDDKKASAEADASASVPEPDASLPEPPT-----ESKHEEIPGWSLSDVDKMAIDSLQ
gm016746_Glyma0 LNENEDKNAGTAV---------PASLPEPTSMDTAMEIKHEEIPGWSLSDVDKMGIDTMQ
gm036476_Glyma1 TNENDDKKASAAA---------DASVPEPPT-----ESKHEEIPGWSLSDVDKMAIDSLQ
gm036477_Glyma1 ----------------------------------------------------------LV
gm036478_Glyma1 ----------------------------------------------------------LV
                                                                            

AT3G12480.1     LASLGKRIDEDEEDYDEEG-
gm042940_Glyma1 LAQLGRPLEEEEEDYDEEEG
gm016746_Glyma0 LANLGSRLEEDEEDYDEEG-
gm036476_Glyma1 LAQLGRPLEEDEEDYDEEEG
gm036477_Glyma1 FAQ--KP-------------
gm036478_Glyma1 FAQ--KP-------------
                :*.
BoxShade v3.31 C (beta, 970507) Output
AT3G12480.1     M R K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K S L E L F L Q D L C D R T Y E I T L E R G A K
gm042940_Glyma1    M R K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K A L E L F L Q D L C D R T Y E I T L Q R G A K
gm016746_Glyma0    M R K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K A L E L F L Q D L C D R T Y E V T L Q R G A K
gm036476_Glyma1    M R K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K A L E L F L Q D L C D R T Y E I T L Q R G A K
gm036477_Glyma1    M R K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K A L E L F L Q D L C D R T Y E I T L Q R G A K
gm036478_Glyma1    M R K K L D T R F P A A R I K K I M Q A D E D V G K I A L A V P V L V S K A L E L F L Q D L C D R T Y E I T L Q R G A K
 
AT3G12480.1     T V S S L H L K H C V E R Y N V F D F L R E V V S K V P D Y G H S Q G Q G H G D V T M D D R S I S K R R K P I S D E V N
gm042940_Glyma1    T M N S L H L K H C V Q S Y N V F D F L R D V V S R V P D Y - - G H G H G H A E A G P D D R V I T K R R K A I G D D G N
gm016746_Glyma0    T M N S L H L K H C V Q S Y S V F D F L R D I V S R V P D Y G H G H G H G H S E A G A D D R A L P K R R K A V G D D G N
gm036476_Glyma1    T M N S L H L K H C V Q S Y N V F D F L R D V V S R V P D Y - - S H G H G H A E A G P D D R A I A K R R K A V G D D G N
gm036477_Glyma1    T M N S L H L K H C V Q S Y N V F D F L R D V V S R V P D Y - - S H G H G H A E A G P D D R A I A K R R K A V G D D G N
gm036478_Glyma1    T M N S L H L K H C V Q S Y N V F D F L R D V V S R V P D Y - - S H G H G H A E A G P D D R A I A K R R K A V G D D G N
 
AT3G12480.1     D S D E E Y K K S K T Q E I G S A K T S G R G G R G R G R G R G R G G R A A K A A E R E G L N R E M E V E A A N S G Q P
gm042940_Glyma1    D S D E E A K R S K M L E L G H T G S T G R - G R G R G R G R G R - G R G R P P L N R E T Y H Q D A E S E P C T S V Q P
gm016746_Glyma0    D S D E E A K R S K M R E L G H T G T P G R - G R G R G R G R G R - G R G A R T I E R D I C H Q Q V E S E P C T S I L Q
gm036476_Glyma1    D S D E E A K R S K M H E L G H T G S T G R - G R G R G R G R G R - G R G R P P L N R E I Y H Q D A E S E P C T S V Q P
gm036477_Glyma1    D S D E E A K R S K M V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm036478_Glyma1    D S D E E A K R S K M V - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G12480.1     P P E D N V K M H A S E S S P Q E D E K K G I D G T A A S N E D T K Q H - - - - - - - - L Q S P K E G I D F D L N A E S
gm042940_Glyma1    S N P Q N T N T S I A - - - - - - - - - - - M D N G S E S K E I P K E E N I A A P V V P V V S T D S L R N I D L N A - I
gm016746_Glyma0    S S N D I P N T S V P - - - - - - - - - - - I D N G P Q S K E L P K E N - - - - F V I S E E S T Q S F R N I D L N A - N
gm036476_Glyma1    S N P Q N T N T S V A - - - - - - - - - - - M D S G S E S K E I P K E Q N I A - - - V P V E S T D S L R N I D L N A - I
gm036477_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I A F F - - - - - - - - - - - - - - - - - - -
gm036478_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - I A F F - - - - - - - - - - - - - - - - - - -
 
AT3G12480.1     L D L N E T K L A - - - - - - - - - - - - - P A T G T T T T T - - T A - A T D S E E Y S G W P M M D I S K M - - D P A Q
gm042940_Glyma1    T N E N D D K K A S A E A D A S A S V P E P D A S L P E P P T - - - - - E S K H E E I P G W S L S D V D K M A I D S L Q
gm016746_Glyma0    L N E N E D K N A G T A V - - - - - - - - - P A S L P E P T S M D T A M E I K H E E I P G W S L S D V D K M G I D T M Q
gm036476_Glyma1    T N E N D D K K A S A A A - - - - - - - - - D A S V P E P P T - - - - - E S K H E E I P G W S L S D V D K M A I D S L Q
gm036477_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L V
gm036478_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L V
 
AT3G12480.1     L A S L G K R I D E D E E D Y D E E G -
gm042940_Glyma1    L A Q L G R P L E E E E E D Y D E E E G
gm016746_Glyma0    L A N L G S R L E E D E E D Y D E E G -
gm036476_Glyma1    L A Q L G R P L E E D E E D Y D E E E G
gm036477_Glyma1    F A Q - - K P - - - - - - - - - - - - -
gm036478_Glyma1    F A Q - - K P - - - - - - - - - - - - -
 
0