fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12680.1 SSNTANLNLGLVTPAT at 388/524 in AT3G12680.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt043232 not found in 474aa AT3G12680.1 not_1st 0.498547918 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12680.1     MAHRQLYSYALQPSYAAAASTVSPAPPPPQQPLPPKTGLSSLYGSSADHYFPDTTY-RFL
pt043232_POPTR_ MA-KQLYGYG-APATTSASR------------------------SRTDSYLTDSVLTRYL
                ** :***.*.  *: ::*:                         * :* *:.*:.  *:*

AT3G12680.1     ARDGSEALSNYSGTLASSSSMYHHLPNT-----------------TASHLAYPQLLQHQE
pt043232_POPTR_ G-TGSDPLSSDSSKYSASSSMYLTQSDSALRYSVDRGIASAAAAATSPHLS---------
                .  **:.**. *.. ::*****   .::                 *:.**:         

AT3G12680.1     VAW--PPGVEVPGAASAVEPLPPGVKRTSEALYYPTLLGAHNTIGQTEAWYTTDYFTKRP
pt043232_POPTR_ -SWPPPPGVDAP---SAVDSLVPGLKRTPEVLYHPTLLGAHSTIGQSEDWYSTNALAKRA
                 :*  ****:.*   ***:.* **:***.*.**:*******.****:* **:*: ::**.

AT3G12680.1     KLESTSHLPIYPQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEA-PVVPN
pt043232_POPTR_ RFETTSHLPIYPQRPGEKDCAYYMLTRTCKFGDTCKFDHPVWVPEGGIPDWKEVPPIATS
                ::*:**********.*****::** *******::*:****:************. *:...

AT3G12680.1     EEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDS---LPERPSEPMCTF
pt043232_POPTR_ ETFPDRPGVPDCPYFLKTQRCKYGLNCKFNHPKEKMSLGVSENTSISALPERPSEPPCAF
                * :*:*** *****::******** :******:*: ::.*. : *   ******** *:*

AT3G12680.1     YMKTGKCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATN----------NPHVTF
pt043232_POPTR_ YMKTGICKFGATCKFHHPKDIQISLAGQ--GNDDGVQTNSVVDNGGITGDVNVIKALVSV
                ***** **** :**********:. :.*  *.. *: ::. . *          :. *:.

AT3G12680.1     TPALYHNSKGLPVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSN
pt043232_POPTR_ TPALLHNSKGLPMRPGEVDCPFYLKTGSCKYGATCRYNHPERTAINPPAAAIGHPIIAPS
                **** *******:*.*****************************: * **.:.:.:::..

AT3G12680.1     TANLNLGLVTPATSFYQTLTQ--PTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFH
pt043232_POPTR_ MANLNLGVFSPAASIYQTIDPRLSTLGVGPTVYPQRPGQAECDFYMKTGECKFGETCKFH
                 ******:.:**:*:***:    .**** .:.*******:***:*********** ****

AT3G12680.1     HPADRLSAMTKQAPQQPNVKLSLAGYPRRE---GALNCPYYMKTGTCKYGATCKFDHPPP
pt043232_POPTR_ HPIDRSAPTAKQTEPQ-TVKLTLAGLPRREVWIGARN-----------------------
                ** ** :. :**:  * .***:*** ****   ** *                       

AT3G12680.1     GEVMAKTTSEADAAGATNTDTTQ
pt043232_POPTR_ -----------------------
BoxShade v3.31 C (beta, 970507) Output
AT3G12680.1     M A H R Q L Y S Y A L Q P S Y A A A A S T V S P A P P P P Q Q P L P P K T G L S S L Y G S S A D H Y F P D T T Y - R F L
pt043232_POPTR_    M A - K Q L Y G Y G - A P A T T S A S R - - - - - - - - - - - - - - - - - - - - - - - - S R T D S Y L T D S V L T R Y L
 
AT3G12680.1     A R D G S E A L S N Y S G T L A S S S S M Y H H L P N T - - - - - - - - - - - - - - - - - T A S H L A Y P Q L L Q H Q E
pt043232_POPTR_    G - T G S D P L S S D S S K Y S A S S S M Y L T Q S D S A L R Y S V D R G I A S A A A A A T S P H L S - - - - - - - - -
 
AT3G12680.1     V A W - - P P G V E V P G A A S A V E P L P P G V K R T S E A L Y Y P T L L G A H N T I G Q T E A W Y T T D Y F T K R P
pt043232_POPTR_    - S W P P P P G V D A P - - - S A V D S L V P G L K R T P E V L Y H P T L L G A H S T I G Q S E D W Y S T N A L A K R A
 
AT3G12680.1     K L E S T S H L P I Y P Q R A G E K D C T H Y M Q T R T C K F G E S C R F D H P I W V P E G G I P D W K E A - P V V P N
pt043232_POPTR_    R F E T T S H L P I Y P Q R P G E K D C A Y Y M L T R T C K F G D T C K F D H P V W V P E G G I P D W K E V P P I A T S
 
AT3G12680.1     E E Y P E R P G E P D C P Y Y I K T Q R C K Y G S K C K F N H P R E E A A V S V E T Q D S - - - L P E R P S E P M C T F
pt043232_POPTR_    E T F P D R P G V P D C P Y F L K T Q R C K Y G L N C K F N H P K E K M S L G V S E N T S I S A L P E R P S E P P C A F
 
AT3G12680.1     Y M K T G K C K F G L S C K F H H P K D I Q L P S S S Q D I G S S V G L T S E P D A T N - - - - - - - - - - N P H V T F
pt043232_POPTR_    Y M K T G I C K F G A T C K F H H P K D I Q I S L A G Q - - G N D D G V Q T N S V V D N G G I T G D V N V I K A L V S V
 
AT3G12680.1     T P A L Y H N S K G L P V R S G E V D C P F Y L K T G S C K Y G A T C R Y N H P E R T A F I P Q A A G V N Y S L V S S N
pt043232_POPTR_    T P A L L H N S K G L P M R P G E V D C P F Y L K T G S C K Y G A T C R Y N H P E R T A I N P P A A A I G H P I I A P S
 
AT3G12680.1     T A N L N L G L V T P A T S F Y Q T L T Q - - P T L G V I S A T Y P Q R P G Q S E C D Y Y M K T G E C K F G E R C K F H
pt043232_POPTR_    M A N L N L G V F S P A A S I Y Q T I D P R L S T L G V G P T V Y P Q R P G Q A E C D F Y M K T G E C K F G E T C K F H
 
AT3G12680.1     H P A D R L S A M T K Q A P Q Q P N V K L S L A G Y P R R E - - - G A L N C P Y Y M K T G T C K Y G A T C K F D H P P P
pt043232_POPTR_    H P I D R S A P T A K Q T E P Q - T V K L T L A G L P R R E V W I G A R N - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G12680.1     G E V M A K T T S E A D A A G A T N T D T T Q
pt043232_POPTR_    - - - - - - - - - - - - - - - - - - - - - - -
 
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