fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021519 not found in 226aa AT3G12720.1 not_1st 0.405750798 II
Pt035735 not found in 307aa AT3G12720.1 not_1st 0.404153354 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G12720.1     MREKWEMKRDEMGHRCCGKHKVKRGLWSPEEDEKLLRYITTHGHPSWSSVPKLAG-----
pt035735_POPTR_ -----------MGHRCCSKQRVQRGLWSPEEDEKLVKYIATHGHGSWSSVPKFAG-----
gm021519_Glyma0 -----------MGHRCCSKQKIKRGLWSPEEDEKLLRYINTHGHKSWSSVPKFAGIHLSR
                           ******.*::::************::** **** *******:**     

AT3G12720.1     LQRCGKSCRLRWINYLRPDLRRGSFNEEEEQIIIDVHRILGNKWAQIAKHLPGRTDNEVK
pt035735_POPTR_ LKRCGKSCRLRWLNYLRPELKRGCFSALEEQVIIDAHRILGNRWSQISKHLPGRTDNEVK
gm021519_Glyma0 LQRCGKSCRLRWINYLRPDLKRGSFTAEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVK
                *:**********:*****:*:**.*.  ***:*** ******:*:**:************

AT3G12720.1     NFWNSCIKKKLLSQGLDPSTHNLMPSHKRSS---SSNN---NNIPKPNKTTSIMKNPTDL
pt035735_POPTR_ NFWNSRIKKKLMAQGLDPKTHNLIPSHQRAANKVACNISPSNQQP----LSIISQDSKMK
gm021519_Glyma0 NFWNSCIKKKLISQGLDPQTHTLLSSHRRSS---AYDGEPLQHLP----YELLMENA---
                ***** *****::*****.**.*:.**:*::   : :    :: *       : ::.   

AT3G12720.1     DQSTTAFSITNINPPTSTKPNKLKSPNQTTIPSQTVIPINDNMSSTQTMIPINDPMSSLL
pt035735_POPTR_ DVS------MEINPPILTLASPYRSHGSTRL--SVIWNVNTQNS----------------
gm021519_Glyma0 ---------TNICSPTYMNPSAVELCN---------------------------------
                          :* .*    ..  .  .                                 

AT3G12720.1     DDENMIPHWSDVDGMAIHEAPMLPSDKAVV-----GVDDDD-----------LNMDILFN
pt035735_POPTR_ YDSSLFPCVSSIENSRVS-----PSSSTSVNPTGFGLLDEDCFWSCSNIVEPFEAAKLFE
gm021519_Glyma0 DDNNV--NW--VSRLNVH----------------------D-----------FSAQTLEE
                 *..:      :.   :                       *           :.   * :

AT3G12720.1     TPSS---------------------SAFDPDF-ASIFSSA-MSIDFNPMDDLGSWTF
pt035735_POPTR_ GMRSQDQENQLNKIFHDNMDASFDTSSYDLELVDSTLFPGSICRDLGSMDDL-SWNF
gm021519_Glyma0 GAQS---------------------SNFDLGFLESVLTSEFISHDLN----------
                   *                     * :*  :  * : .  :. *:.
BoxShade v3.31 C (beta, 970507) Output
AT3G12720.1     M R E K W E M K R D E M G H R C C G K H K V K R G L W S P E E D E K L L R Y I T T H G H P S W S S V P K L A G - - - - -
pt035735_POPTR_    - - - - - - - - - - - M G H R C C S K Q R V Q R G L W S P E E D E K L V K Y I A T H G H G S W S S V P K F A G - - - - -
gm021519_Glyma0    - - - - - - - - - - - M G H R C C S K Q K I K R G L W S P E E D E K L L R Y I N T H G H K S W S S V P K F A G I H L S R
 
AT3G12720.1     L Q R C G K S C R L R W I N Y L R P D L R R G S F N E E E E Q I I I D V H R I L G N K W A Q I A K H L P G R T D N E V K
pt035735_POPTR_    L K R C G K S C R L R W L N Y L R P E L K R G C F S A L E E Q V I I D A H R I L G N R W S Q I S K H L P G R T D N E V K
gm021519_Glyma0    L Q R C G K S C R L R W I N Y L R P D L K R G S F T A E E E Q I I I D I H R I L G N R W A Q I A K H L P G R T D N E V K
 
AT3G12720.1     N F W N S C I K K K L L S Q G L D P S T H N L M P S H K R S S - - - S S N N - - - N N I P K P N K T T S I M K N P T D L
pt035735_POPTR_    N F W N S R I K K K L M A Q G L D P K T H N L I P S H Q R A A N K V A C N I S P S N Q Q P - - - - L S I I S Q D S K M K
gm021519_Glyma0    N F W N S C I K K K L I S Q G L D P Q T H T L L S S H R R S S - - - A Y D G E P L Q H L P - - - - Y E L L M E N A - - -
 
AT3G12720.1     D Q S T T A F S I T N I N P P T S T K P N K L K S P N Q T T I P S Q T V I P I N D N M S S T Q T M I P I N D P M S S L L
pt035735_POPTR_    D V S - - - - - - M E I N P P I L T L A S P Y R S H G S T R L - - S V I W N V N T Q N S - - - - - - - - - - - - - - - -
gm021519_Glyma0    - - - - - - - - - T N I C S P T Y M N P S A V E L C N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G12720.1     D D E N M I P H W S D V D G M A I H E A P M L P S D K A V V - - - - - G V D D D D - - - - - - - - - - - L N M D I L F N
pt035735_POPTR_    Y D S S L F P C V S S I E N S R V S - - - - - P S S S T S V N P T G F G L L D E D C F W S C S N I V E P F E A A K L F E
gm021519_Glyma0    D D N N V - - N W - - V S R L N V H - - - - - - - - - - - - - - - - - - - - - - D - - - - - - - - - - - F S A Q T L E E
 
AT3G12720.1     T P S S - - - - - - - - - - - - - - - - - - - - - S A F D P D F - A S I F S S A - M S I D F N P M D D L G S W T F
pt035735_POPTR_    G M R S Q D Q E N Q L N K I F H D N M D A S F D T S S Y D L E L V D S T L F P G S I C R D L G S M D D L - S W N F
gm021519_Glyma0    G A Q S - - - - - - - - - - - - - - - - - - - - - S N F D L G F L E S V L T S E F I S H D L N - - - - - - - - - -
 
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