fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043241 not found in 281aa AT3G12720.1 1st_1st 0.408945686 Ia
Pt041169 not found in 277aa AT3G12720.1 1st_1st 0.453674121 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G12720.1     MREKWEMKRDEMGHRCCGKHKVKRGLWSPEEDEKLLRYITTHGHPSWSSVPKLAGLQRCG
gm043241_Glyma1 -----------MGHRCCSKQKIKRGLWSPEEDEKLLRYINTHGQKSWS-------LQRCG
pt041169_POPTR_ -----------MGHRCCNKQKVKRGLWSPEEDEKLVKYITSHGHGSWSSVPKFAGLKRCG
                           ******.*:*:*************::**.:**: ***       *:***

AT3G12720.1     KSCRLRWINYLRPDLRRGSFNEEEEQIIIDVHRILGNKWAQIAKHLPGRTDNEVKNFWNS
gm043241_Glyma1 KSCRLRWINYLRPDLKRGSFTAEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVKNFWNS
pt041169_POPTR_ KSCRLRWINYLRPELKRGSFSAEEEQIIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNS
                *************:*:****. ********:******:**********************

AT3G12720.1     CIKKKLLSQGLDPSTHNLMPSHKRSSSSNNNNIPKPNKTT-SIMKN-----PTDLDQSTT
gm043241_Glyma1 CIKKKLISQGLDPQTHTLLSSHRRSSVCTISNIHQNSNSI-FIMSSHIPNAP--LENTTN
pt041169_POPTR_ CIKKKLMAQGLDPKTHNLIPSHQRAANKVACNISQSNQQPFSIIT---------LDSKMK
                ******::*****.**.*:.**:*::     ** : .:    *:.         *:.. .

AT3G12720.1     -------AFSITNINPPTSTKPNKLKSPNQTTIP---SQTVIPINDNMSSTQTMIPINDP
gm043241_Glyma1 IVQIPSVDNAITNICSPTYMNP---------------SAVELFNNDNNVNWVSTVNVEDF
pt041169_POPTR_ -------DYSM-EINPPILTLPSPYPSNSSTQPPLLQTTTSLPL--PTSSYQNPTKVFEV
                         :: :* .*    *               : . :       .  .   : : 

AT3G12720.1     MSSLLDDENM----IPHWSDVDGMAIHEAPMLPSDKAVVGVDDDDLNMDILFNTPSSSAF
gm043241_Glyma1 SAQTLEEGTQVQVQVQHEKD----KTCEDMGIDVREANNG----NIETSASFESSN---F
pt041169_POPTR_ MQS-QDQENQ-----PN-------KICDAQIMDNTK---GVHD---NMDASFDTTS---Y
                  .  :: .       :          :   :   :   *      : .  *::..   :

AT3G12720.1     DPDFAS---IFSSAMSIDFNPMDDLGSWTF
gm043241_Glyma1 DFGLLES-VLTSEFISYDFNCMDEL-AWNF
pt041169_POPTR_ DLEFVDSTILLPGSMCRDLSSMDDL-AWNF
                *  : .   : .  :. *:. **:* :*.*
BoxShade v3.31 C (beta, 970507) Output
AT3G12720.1     M R E K W E M K R D E M G H R C C G K H K V K R G L W S P E E D E K L L R Y I T T H G H P S W S S V P K L A G L Q R C G
gm043241_Glyma1    - - - - - - - - - - - M G H R C C S K Q K I K R G L W S P E E D E K L L R Y I N T H G Q K S W S - - - - - - - L Q R C G
pt041169_POPTR_    - - - - - - - - - - - M G H R C C N K Q K V K R G L W S P E E D E K L V K Y I T S H G H G S W S S V P K F A G L K R C G
 
AT3G12720.1     K S C R L R W I N Y L R P D L R R G S F N E E E E Q I I I D V H R I L G N K W A Q I A K H L P G R T D N E V K N F W N S
gm043241_Glyma1    K S C R L R W I N Y L R P D L K R G S F T A E E E Q I I I D I H R I L G N R W A Q I A K H L P G R T D N E V K N F W N S
pt041169_POPTR_    K S C R L R W I N Y L R P E L K R G S F S A E E E Q I I I D V H R I L G N R W A Q I A K H L P G R T D N E V K N F W N S
 
AT3G12720.1     C I K K K L L S Q G L D P S T H N L M P S H K R S S S S N N N N I P K P N K T T - S I M K N - - - - - P T D L D Q S T T
gm043241_Glyma1    C I K K K L I S Q G L D P Q T H T L L S S H R R S S V C T I S N I H Q N S N S I - F I M S S H I P N A P - - L E N T T N
pt041169_POPTR_    C I K K K L M A Q G L D P K T H N L I P S H Q R A A N K V A C N I S Q S N Q Q P F S I I T - - - - - - - - - L D S K M K
 
AT3G12720.1     - - - - - - - A F S I T N I N P P T S T K P N K L K S P N Q T T I P - - - S Q T V I P I N D N M S S T Q T M I P I N D P
gm043241_Glyma1    I V Q I P S V D N A I T N I C S P T Y M N P - - - - - - - - - - - - - - - S A V E L F N N D N N V N W V S T V N V E D F
pt041169_POPTR_    - - - - - - - D Y S M - E I N P P I L T L P S P Y P S N S S T Q P P L L Q T T T S L P L - - P T S S Y Q N P T K V F E V
 
AT3G12720.1     M S S L L D D E N M - - - - I P H W S D V D G M A I H E A P M L P S D K A V V G V D D D D L N M D I L F N T P S S S A F
gm043241_Glyma1    S A Q T L E E G T Q V Q V Q V Q H E K D - - - - K T C E D M G I D V R E A N N G - - - - N I E T S A S F E S S N - - - F
pt041169_POPTR_    M Q S - Q D Q E N Q - - - - - P N - - - - - - - K I C D A Q I M D N T K - - - G V H D - - - N M D A S F D T T S - - - Y
 
AT3G12720.1     D P D F A S - - - I F S S A M S I D F N P M D D L G S W T F
gm043241_Glyma1    D F G L L E S - V L T S E F I S Y D F N C M D E L - A W N F
pt041169_POPTR_    D L E F V D S T I L L P G S M C R D L S S M D D L - A W N F
 
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