fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt035735 not found in 307aa AT3G12720.1 not_1st 0.404153354 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12720.1     MREKWEMKRDEMGHRCCGKHKVKRGLWSPEEDEKLLRYITTHGHPSWSSVPKLAGLQRCG
pt035735_POPTR_ -----------MGHRCCSKQRVQRGLWSPEEDEKLVKYIATHGHGSWSSVPKFAGLKRCG
                           ******.*::*:************::**:**** *******:***:***

AT3G12720.1     KSCRLRWINYLRPDLRRGSFNEEEEQIIIDVHRILGNKWAQIAKHLPGRTDNEVKNFWNS
pt035735_POPTR_ KSCRLRWLNYLRPELKRGCFSALEEQVIIDAHRILGNRWSQISKHLPGRTDNEVKNFWNS
                *******:*****:*:**.*.  ***:***.******:*:**:*****************

AT3G12720.1     CIKKKLLSQGLDPSTHNLMPSHKRSSSSNNNNI-PKPNKTTSIMKNPTDLDQSTTAFSIT
pt035735_POPTR_ RIKKKLMAQGLDPKTHNLIPSHQRAANKVACNISPSNQQPLSIISQDSKMKDVS-----M
                 *****::*****.****:***:*::..   ** *. ::. **:.: :.:.: :      

AT3G12720.1     NINPPTSTKPNKLKSPNQTTIPSQTVIPINDNMSSTQTMIP-----------------IN
pt035735_POPTR_ EINPPILTLASPYRSHGSTRL--SVIWNVNTQNSYDSSLFPCVSSIENSRVSPSSSTSVN
                :****  * ..  :* ..* :  ..:  :* : *  .:::*                 :*

AT3G12720.1     DPMSSLLDDENMIPHWSDVDGMAIHEAPMLPSDKAVVGVDDDDL----------NMDILF
pt035735_POPTR_ PTGFGLLDEDCF---WSCSNIVEPFEAA-----KLFEGMRSQDQENQLNKIFHDNMDASF
                 .  .***:: :   **  : :  .**.     * . *: .:*           ***  *

AT3G12720.1     NTPSSSAFDPDF--ASIFSSAMSIDFNPMDDLGSWTF
pt035735_POPTR_ DT---SSYDLELVDSTLFPGSICRDLGSMDDL-SWNF
                :*   *::* ::  :::*..::. *:..**** **.*
BoxShade v3.31 C (beta, 970507) Output
AT3G12720.1     M R E K W E M K R D E M G H R C C G K H K V K R G L W S P E E D E K L L R Y I T T H G H P S W S S V P K L A G L Q R C G
pt035735_POPTR_    - - - - - - - - - - - M G H R C C S K Q R V Q R G L W S P E E D E K L V K Y I A T H G H G S W S S V P K F A G L K R C G
 
AT3G12720.1     K S C R L R W I N Y L R P D L R R G S F N E E E E Q I I I D V H R I L G N K W A Q I A K H L P G R T D N E V K N F W N S
pt035735_POPTR_    K S C R L R W L N Y L R P E L K R G C F S A L E E Q V I I D A H R I L G N R W S Q I S K H L P G R T D N E V K N F W N S
 
AT3G12720.1     C I K K K L L S Q G L D P S T H N L M P S H K R S S S S N N N N I - P K P N K T T S I M K N P T D L D Q S T T A F S I T
pt035735_POPTR_    R I K K K L M A Q G L D P K T H N L I P S H Q R A A N K V A C N I S P S N Q Q P L S I I S Q D S K M K D V S - - - - - M
 
AT3G12720.1     N I N P P T S T K P N K L K S P N Q T T I P S Q T V I P I N D N M S S T Q T M I P - - - - - - - - - - - - - - - - - I N
pt035735_POPTR_    E I N P P I L T L A S P Y R S H G S T R L - - S V I W N V N T Q N S Y D S S L F P C V S S I E N S R V S P S S S T S V N
 
AT3G12720.1     D P M S S L L D D E N M I P H W S D V D G M A I H E A P M L P S D K A V V G V D D D D L - - - - - - - - - - N M D I L F
pt035735_POPTR_    P T G F G L L D E D C F - - - W S C S N I V E P F E A A - - - - - K L F E G M R S Q D Q E N Q L N K I F H D N M D A S F
 
AT3G12720.1     N T P S S S A F D P D F - - A S I F S S A M S I D F N P M D D L G S W T F
pt035735_POPTR_    D T - - - S S Y D L E L V D S T L F P G S I C R D L G S M D D L - S W N F
 
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