fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041169 not found in 277aa AT3G12720.1 1st_1st 0.453674121 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12720.1     MREKWEMKRDEMGHRCCGKHKVKRGLWSPEEDEKLLRYITTHGHPSWSSVPKLAGLQRCG
pt041169_POPTR_ -----------MGHRCCNKQKVKRGLWSPEEDEKLVKYITSHGHGSWSSVPKFAGLKRCG
                           ******.*:***************::***:*** *******:***:***

AT3G12720.1     KSCRLRWINYLRPDLRRGSFNEEEEQIIIDVHRILGNKWAQIAKHLPGRTDNEVKNFWNS
pt041169_POPTR_ KSCRLRWINYLRPELKRGSFSAEEEQIIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNS
                *************:*:****. ***************:**********************

AT3G12720.1     CIKKKLLSQGLDPSTHNLMPSHKRSSSSNNNNIPKPNKTT-SIMKNPTDLDQSTTAFSIT
pt041169_POPTR_ CIKKKLMAQGLDPKTHNLIPSHQRAANKVACNISQSNQQPFSIIT----LDSKMKDYSM-
                ******::*****.****:***:*::..   **.:.*: . **:.    **.. . :*: 

AT3G12720.1     NINPPTSTKPNKLKSPNQTTIP---SQTVIPINDNMSSTQTMIPINDPMSSLLDDENMIP
pt041169_POPTR_ EINPPILTLPSPYPSNSSTQPPLLQTTTSLPL--PTSSYQNPTKVFEVMQS-QDQENQ-P
                :****  * *.   * ..*  *   : * :*:    ** *.   : : *.*  *:**  *

AT3G12720.1     HWSDVDGMAIHEAPMLPSDKAVVGVDDDDLNMDILFNTPSSSAFDPDFAS---IFSSAMS
pt041169_POPTR_ N-------KICDAQIMDNTK---GVHD---NMDASFDTTS---YDLEFVDSTILLPGSMC
                :        * :* :: . *   **.*   ***  *:*.*   :* :*..   ::..:*.

AT3G12720.1     IDFNPMDDLGSWTF
pt041169_POPTR_ RDLSSMDDL-AWNF
                 *:..**** :*.*
BoxShade v3.31 C (beta, 970507) Output
AT3G12720.1     M R E K W E M K R D E M G H R C C G K H K V K R G L W S P E E D E K L L R Y I T T H G H P S W S S V P K L A G L Q R C G
pt041169_POPTR_    - - - - - - - - - - - M G H R C C N K Q K V K R G L W S P E E D E K L V K Y I T S H G H G S W S S V P K F A G L K R C G
 
AT3G12720.1     K S C R L R W I N Y L R P D L R R G S F N E E E E Q I I I D V H R I L G N K W A Q I A K H L P G R T D N E V K N F W N S
pt041169_POPTR_    K S C R L R W I N Y L R P E L K R G S F S A E E E Q I I I D V H R I L G N R W A Q I A K H L P G R T D N E V K N F W N S
 
AT3G12720.1     C I K K K L L S Q G L D P S T H N L M P S H K R S S S S N N N N I P K P N K T T - S I M K N P T D L D Q S T T A F S I T
pt041169_POPTR_    C I K K K L M A Q G L D P K T H N L I P S H Q R A A N K V A C N I S Q S N Q Q P F S I I T - - - - L D S K M K D Y S M -
 
AT3G12720.1     N I N P P T S T K P N K L K S P N Q T T I P - - - S Q T V I P I N D N M S S T Q T M I P I N D P M S S L L D D E N M I P
pt041169_POPTR_    E I N P P I L T L P S P Y P S N S S T Q P P L L Q T T T S L P L - - P T S S Y Q N P T K V F E V M Q S - Q D Q E N Q - P
 
AT3G12720.1     H W S D V D G M A I H E A P M L P S D K A V V G V D D D D L N M D I L F N T P S S S A F D P D F A S - - - I F S S A M S
pt041169_POPTR_    N - - - - - - - K I C D A Q I M D N T K - - - G V H D - - - N M D A S F D T T S - - - Y D L E F V D S T I L L P G S M C
 
AT3G12720.1     I D F N P M D D L G S W T F
pt041169_POPTR_    R D L S S M D D L - A W N F
 
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