fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt041169 not found in 277aa AT3G12720.1 1st_1st 0.453674121 Ia
Pt035735 not found in 307aa AT3G12720.1 not_1st 0.404153354 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G12720.1     MREKWEMKRDEMGHRCCGKHKVKRGLWSPEEDEKLLRYITTHGHPSWSSVPKLAGLQRCG
pt035735_POPTR_ -----------MGHRCCSKQRVQRGLWSPEEDEKLVKYIATHGHGSWSSVPKFAGLKRCG
pt041169_POPTR_ -----------MGHRCCNKQKVKRGLWSPEEDEKLVKYITSHGHGSWSSVPKFAGLKRCG
                           ******.*::*:************::**::*** *******:***:***

AT3G12720.1     KSCRLRWINYLRPDLRRGSFNEEEEQIIIDVHRILGNKWAQIAKHLPGRTDNEVKNFWNS
pt035735_POPTR_ KSCRLRWLNYLRPELKRGCFSALEEQVIIDAHRILGNRWSQISKHLPGRTDNEVKNFWNS
pt041169_POPTR_ KSCRLRWINYLRPELKRGSFSAEEEQIIIDVHRILGNRWAQIAKHLPGRTDNEVKNFWNS
                *******:*****:*:**.*.  ***:***.******:*:**:*****************

AT3G12720.1     CIKKKLLSQGLDPSTHNLMPSHKRSSSSNNNNIPKPNKTT-SIMKNPTDLDQSTTAFSIT
pt035735_POPTR_ RIKKKLMAQGLDPKTHNLIPSHQRAANKVACNISPSNQQPLSIIS----QDSKMKDVSM-
pt041169_POPTR_ CIKKKLMAQGLDPKTHNLIPSHQRAANKVACNISQSNQQPFSIIT----LDSKMKDYSM-
                 *****::*****.****:***:*::..   **. .*: . **:.     *.. .  *: 

AT3G12720.1     NINPPTSTKPNKLKS-----------------------PNQTTIPSQTVIPINDNM-SST
pt035735_POPTR_ EINPPILTLASPYRSHGSTRLSVIWNVNTQNSYDSSLFPCVSSIENSRVSPSSSTSVNPT
pt041169_POPTR_ EINPPILTLPSPYPSNSSTQ------------------PPLLQTTTSLPLPTSSYQ-NPT
                :****  * ..   *                       *      ..   * ..   ..*

AT3G12720.1     -------------QTMI------PINDPMSSLLDDENMIPHWSDVDGMA----IHEAPML
pt035735_POPTR_ GFGLLDEDCFWSCSNIVEPFEAAKLFEGMRS-QDQENQLNKI-----------FHD----
pt041169_POPTR_ -----------------------KVFEVMQS-QDQENQPNKICDAQIMDNTKGVHD----
                                        : : * *  *:**   :            .*:    

AT3G12720.1     PSDKAVVGVDDDDLNMDILFNTPSSSAFDPDFAS---IFSSAMSIDFNPMDDLGSWTF
pt035735_POPTR_ --------------NMDASFDT---SSYDLELVDST-LFPGSICRDLGSMDDL-SWNF
pt041169_POPTR_ --------------NMDASFDT---TSYDLEFVDSTILLPGSMCRDLSSMDDL-AWNF
                              ***  *:*   :::* ::..   ::..::. *:..**** :*.*
BoxShade v3.31 C (beta, 970507) Output
AT3G12720.1     M R E K W E M K R D E M G H R C C G K H K V K R G L W S P E E D E K L L R Y I T T H G H P S W S S V P K L A G L Q R C G
pt035735_POPTR_    - - - - - - - - - - - M G H R C C S K Q R V Q R G L W S P E E D E K L V K Y I A T H G H G S W S S V P K F A G L K R C G
pt041169_POPTR_    - - - - - - - - - - - M G H R C C N K Q K V K R G L W S P E E D E K L V K Y I T S H G H G S W S S V P K F A G L K R C G
 
AT3G12720.1     K S C R L R W I N Y L R P D L R R G S F N E E E E Q I I I D V H R I L G N K W A Q I A K H L P G R T D N E V K N F W N S
pt035735_POPTR_    K S C R L R W L N Y L R P E L K R G C F S A L E E Q V I I D A H R I L G N R W S Q I S K H L P G R T D N E V K N F W N S
pt041169_POPTR_    K S C R L R W I N Y L R P E L K R G S F S A E E E Q I I I D V H R I L G N R W A Q I A K H L P G R T D N E V K N F W N S
 
AT3G12720.1     C I K K K L L S Q G L D P S T H N L M P S H K R S S S S N N N N I P K P N K T T - S I M K N P T D L D Q S T T A F S I T
pt035735_POPTR_    R I K K K L M A Q G L D P K T H N L I P S H Q R A A N K V A C N I S P S N Q Q P L S I I S - - - - Q D S K M K D V S M -
pt041169_POPTR_    C I K K K L M A Q G L D P K T H N L I P S H Q R A A N K V A C N I S Q S N Q Q P F S I I T - - - - L D S K M K D Y S M -
 
AT3G12720.1     N I N P P T S T K P N K L K S - - - - - - - - - - - - - - - - - - - - - - - P N Q T T I P S Q T V I P I N D N M - S S T
pt035735_POPTR_    E I N P P I L T L A S P Y R S H G S T R L S V I W N V N T Q N S Y D S S L F P C V S S I E N S R V S P S S S T S V N P T
pt041169_POPTR_    E I N P P I L T L P S P Y P S N S S T Q - - - - - - - - - - - - - - - - - - P P L L Q T T T S L P L P T S S Y Q - N P T
 
AT3G12720.1     - - - - - - - - - - - - - Q T M I - - - - - - P I N D P M S S L L D D E N M I P H W S D V D G M A - - - - I H E A P M L
pt035735_POPTR_    G F G L L D E D C F W S C S N I V E P F E A A K L F E G M R S - Q D Q E N Q L N K I - - - - - - - - - - - F H D - - - -
pt041169_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - K V F E V M Q S - Q D Q E N Q P N K I C D A Q I M D N T K G V H D - - - -
 
AT3G12720.1     P S D K A V V G V D D D D L N M D I L F N T P S S S A F D P D F A S - - - I F S S A M S I D F N P M D D L G S W T F
pt035735_POPTR_    - - - - - - - - - - - - - - N M D A S F D T - - - S S Y D L E L V D S T - L F P G S I C R D L G S M D D L - S W N F
pt041169_POPTR_    - - - - - - - - - - - - - - N M D A S F D T - - - T S Y D L E F V D S T I L L P G S M C R D L S S M D D L - A W N F
 
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