fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021519 not found in 226aa AT3G12720.1 not_1st 0.405750798 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12720.1     MREKWEMKRDEMGHRCCGKHKVKRGLWSPEEDEKLLRYITTHGHPSWSSVPKLAG-----
gm021519_Glyma0 -----------MGHRCCSKQKIKRGLWSPEEDEKLLRYINTHGHKSWSSVPKFAGIHLSR
                           ******.*:*:*****************.**** *******:**     

AT3G12720.1     LQRCGKSCRLRWINYLRPDLRRGSFNEEEEQIIIDVHRILGNKWAQIAKHLPGRTDNEVK
gm021519_Glyma0 LQRCGKSCRLRWINYLRPDLKRGSFTAEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVK
                ********************:****. ********:******:*****************

AT3G12720.1     NFWNSCIKKKLLSQGLDPSTHNLMPSHKRSSSSNN---NNIPKPNKTTSIMKNPTDLDQS
gm021519_Glyma0 NFWNSCIKKKLISQGLDPQTHTLLSSHRRSSAYDGEPLQHLP----YELLMENA------
                ***********:******.**.*:.**:***: :.   :::*       :*:*.      

AT3G12720.1     TTAFSITNINPPTSTKPNKLKSPNQTTIPSQTVIPINDNMSSTQTMIPINDPMSSLLDDE
gm021519_Glyma0 ------TNICSPTYMNPSAVELCN---------------------------------DDN
                      *** .**  :*. ::  *                                 **:

AT3G12720.1     NMIPHWSDVDGMAIHEAPMLPSDKAVVGVDDDDLNMDILFNTPSSSAFDPDF-ASIFSSA
gm021519_Glyma0 NV--NW--VSRLNVH-----------------DFSAQTLEEGAQSSNFDLGFLESVLTSE
                *:  :*  *. : :*                 *:. : * : ..** ** .*  *:::* 

AT3G12720.1     -MSIDFNPMDDLGSWTF
gm021519_Glyma0 FISHDLN----------
                 :* *:*
BoxShade v3.31 C (beta, 970507) Output
AT3G12720.1     M R E K W E M K R D E M G H R C C G K H K V K R G L W S P E E D E K L L R Y I T T H G H P S W S S V P K L A G - - - - -
gm021519_Glyma0    - - - - - - - - - - - M G H R C C S K Q K I K R G L W S P E E D E K L L R Y I N T H G H K S W S S V P K F A G I H L S R
 
AT3G12720.1     L Q R C G K S C R L R W I N Y L R P D L R R G S F N E E E E Q I I I D V H R I L G N K W A Q I A K H L P G R T D N E V K
gm021519_Glyma0    L Q R C G K S C R L R W I N Y L R P D L K R G S F T A E E E Q I I I D I H R I L G N R W A Q I A K H L P G R T D N E V K
 
AT3G12720.1     N F W N S C I K K K L L S Q G L D P S T H N L M P S H K R S S S S N N - - - N N I P K P N K T T S I M K N P T D L D Q S
gm021519_Glyma0    N F W N S C I K K K L I S Q G L D P Q T H T L L S S H R R S S A Y D G E P L Q H L P - - - - Y E L L M E N A - - - - - -
 
AT3G12720.1     T T A F S I T N I N P P T S T K P N K L K S P N Q T T I P S Q T V I P I N D N M S S T Q T M I P I N D P M S S L L D D E
gm021519_Glyma0    - - - - - - T N I C S P T Y M N P S A V E L C N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D D N
 
AT3G12720.1     N M I P H W S D V D G M A I H E A P M L P S D K A V V G V D D D D L N M D I L F N T P S S S A F D P D F - A S I F S S A
gm021519_Glyma0    N V - - N W - - V S R L N V H - - - - - - - - - - - - - - - - - D F S A Q T L E E G A Q S S N F D L G F L E S V L T S E
 
AT3G12720.1     - M S I D F N P M D D L G S W T F
gm021519_Glyma0    F I S H D L N - - - - - - - - - -
 
0