fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043241 not found in 281aa AT3G12720.1 1st_1st 0.408945686 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12720.1     MREKWEMKRDEMGHRCCGKHKVKRGLWSPEEDEKLLRYITTHGHPSWSSVPKLAGLQRCG
gm043241_Glyma1 -----------MGHRCCSKQKIKRGLWSPEEDEKLLRYINTHGQKSWS-------LQRCG
                           ******.*:*:*****************.***: ***       *****

AT3G12720.1     KSCRLRWINYLRPDLRRGSFNEEEEQIIIDVHRILGNKWAQIAKHLPGRTDNEVKNFWNS
gm043241_Glyma1 KSCRLRWINYLRPDLKRGSFTAEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVKNFWNS
                ***************:****. ********:******:**********************

AT3G12720.1     CIKKKLLSQGLDPSTHNLMPSHKRSSSSNNNNIPKPNKTTSIM---------KNPTDLDQ
gm043241_Glyma1 CIKKKLISQGLDPQTHTLLSSHRRSSVCTISNIHQNSNSIFIMSSHIPNAPLENTTNIVQ
                ******:******.**.*:.**:*** .. .** : .::  **         :*.*:: *

AT3G12720.1     -STTAFSITNINPPTSTKPNKLKSPNQTTIPSQTVIPINDNMSSTQTMIPINDPMSSLLD
gm043241_Glyma1 IPSVDNAITNICSPTYMNPSAVELFN------------NDNNVNWVSTVNVEDFSAQTLE
                 .:.  :**** .**  :*. ::  *            ***  .  : : ::*  :. *:

AT3G12720.1     DENMIPHWSDVDGMAIHEAPMLPSDKAVVGVDDDDLNMDILFNTPSSSAFDP---DFA--
gm043241_Glyma1 EG------TQVQVQVQHEKDKTCED---MGIDVREANNG---NIETSASFESSNFDFGLL
                :       ::*:  . **     .*   :*:*  : * .   *  :*::*:.   **.  

AT3G12720.1     -SIFSSA-MSIDFNPMDDLGSWTF
gm043241_Glyma1 ESVLTSEFISYDFNCMDEL-AWNF
                 *:::*  :* *** **:* :*.*
BoxShade v3.31 C (beta, 970507) Output
AT3G12720.1     M R E K W E M K R D E M G H R C C G K H K V K R G L W S P E E D E K L L R Y I T T H G H P S W S S V P K L A G L Q R C G
gm043241_Glyma1    - - - - - - - - - - - M G H R C C S K Q K I K R G L W S P E E D E K L L R Y I N T H G Q K S W S - - - - - - - L Q R C G
 
AT3G12720.1     K S C R L R W I N Y L R P D L R R G S F N E E E E Q I I I D V H R I L G N K W A Q I A K H L P G R T D N E V K N F W N S
gm043241_Glyma1    K S C R L R W I N Y L R P D L K R G S F T A E E E Q I I I D I H R I L G N R W A Q I A K H L P G R T D N E V K N F W N S
 
AT3G12720.1     C I K K K L L S Q G L D P S T H N L M P S H K R S S S S N N N N I P K P N K T T S I M - - - - - - - - - K N P T D L D Q
gm043241_Glyma1    C I K K K L I S Q G L D P Q T H T L L S S H R R S S V C T I S N I H Q N S N S I F I M S S H I P N A P L E N T T N I V Q
 
AT3G12720.1     - S T T A F S I T N I N P P T S T K P N K L K S P N Q T T I P S Q T V I P I N D N M S S T Q T M I P I N D P M S S L L D
gm043241_Glyma1    I P S V D N A I T N I C S P T Y M N P S A V E L F N - - - - - - - - - - - - N D N N V N W V S T V N V E D F S A Q T L E
 
AT3G12720.1     D E N M I P H W S D V D G M A I H E A P M L P S D K A V V G V D D D D L N M D I L F N T P S S S A F D P - - - D F A - -
gm043241_Glyma1    E G - - - - - - T Q V Q V Q V Q H E K D K T C E D - - - M G I D V R E A N N G - - - N I E T S A S F E S S N F D F G L L
 
AT3G12720.1     - S I F S S A - M S I D F N P M D D L G S W T F
gm043241_Glyma1    E S V L T S E F I S Y D F N C M D E L - A W N F
 
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