fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12720.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043241 not found in 281aa AT3G12720.1 1st_1st 0.408945686 Ia
Gm021519 not found in 226aa AT3G12720.1 not_1st 0.405750798 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G12720.1     MREKWEMKRDEMGHRCCGKHKVKRGLWSPEEDEKLLRYITTHGHPSWSSVPKLAG-----
gm043241_Glyma1 -----------MGHRCCSKQKIKRGLWSPEEDEKLLRYINTHGQKSWS------------
gm021519_Glyma0 -----------MGHRCCSKQKIKRGLWSPEEDEKLLRYINTHGHKSWSSVPKFAGIHLSR
                           ******.*:*:*****************.***: ***            

AT3G12720.1     LQRCGKSCRLRWINYLRPDLRRGSFNEEEEQIIIDVHRILGNKWAQIAKHLPGRTDNEVK
gm043241_Glyma1 LQRCGKSCRLRWINYLRPDLKRGSFTAEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVK
gm021519_Glyma0 LQRCGKSCRLRWINYLRPDLKRGSFTAEEEQIIIDIHRILGNRWAQIAKHLPGRTDNEVK
                ********************:****. ********:******:*****************

AT3G12720.1     NFWNSCIKKKLLSQGLDPSTHNLMPSHKRSSSSNNNNIPKPNKTTSIM--KNPTDLDQST
gm043241_Glyma1 NFWNSCIKKKLISQGLDPQTHTLLSSHRRSSVCTISNIHQNSNSIFIMSSHIPNAPLENT
gm021519_Glyma0 NFWNSCIKKKLISQGLDPQTHTLLSSHRRSSAYDGEPLQ-----------HLPYELL---
                ***********:******.**.*:.**:***    . :            : *       

AT3G12720.1     TAF--------SITNINPPTSTKPNKLKSPNQTTIPSQTVIPINDNMSSTQTMIPINDPM
gm043241_Glyma1 TNIVQIPSVDNAITNICSPTYMNPSAVELFN------------NDNNVNWVSTVNVEDFS
gm021519_Glyma0 --------MENA-TNICSPTYMNPSAVELCN------------DDNNVNWVSRLNVHDFS
                           : *** .**  :*. ::  *            :**  .  : : :.*  

AT3G12720.1     SSLLDDENMIPHWSDVDGMAIHEAPMLPSDKAVVGVDDDDLNMDILFNTPS--SSAFDPD
gm043241_Glyma1 AQTLEEGTQV------QVQVQHEKDKTCED---MGIDVREANNGNIETSASFESSNFDFG
gm021519_Glyma0 AQTLEEGAQ--------------------------------------------SSNFDLG
                :. *::                                               ** ** .

AT3G12720.1     F-ASIFSSA-MSIDFNPMDDLGSWTF
gm043241_Glyma1 LLESVLTSEFISYDFNCMDEL-AWNF
gm021519_Glyma0 FLESVLTSEFISHDLN----------
                :  *:::*  :* *:*
BoxShade v3.31 C (beta, 970507) Output
AT3G12720.1     M R E K W E M K R D E M G H R C C G K H K V K R G L W S P E E D E K L L R Y I T T H G H P S W S S V P K L A G - - - - -
gm043241_Glyma1    - - - - - - - - - - - M G H R C C S K Q K I K R G L W S P E E D E K L L R Y I N T H G Q K S W S - - - - - - - - - - - -
gm021519_Glyma0    - - - - - - - - - - - M G H R C C S K Q K I K R G L W S P E E D E K L L R Y I N T H G H K S W S S V P K F A G I H L S R
 
AT3G12720.1     L Q R C G K S C R L R W I N Y L R P D L R R G S F N E E E E Q I I I D V H R I L G N K W A Q I A K H L P G R T D N E V K
gm043241_Glyma1    L Q R C G K S C R L R W I N Y L R P D L K R G S F T A E E E Q I I I D I H R I L G N R W A Q I A K H L P G R T D N E V K
gm021519_Glyma0    L Q R C G K S C R L R W I N Y L R P D L K R G S F T A E E E Q I I I D I H R I L G N R W A Q I A K H L P G R T D N E V K
 
AT3G12720.1     N F W N S C I K K K L L S Q G L D P S T H N L M P S H K R S S S S N N N N I P K P N K T T S I M - - K N P T D L D Q S T
gm043241_Glyma1    N F W N S C I K K K L I S Q G L D P Q T H T L L S S H R R S S V C T I S N I H Q N S N S I F I M S S H I P N A P L E N T
gm021519_Glyma0    N F W N S C I K K K L I S Q G L D P Q T H T L L S S H R R S S A Y D G E P L Q - - - - - - - - - - - H L P Y E L L - - -
 
AT3G12720.1     T A F - - - - - - - - S I T N I N P P T S T K P N K L K S P N Q T T I P S Q T V I P I N D N M S S T Q T M I P I N D P M
gm043241_Glyma1    T N I V Q I P S V D N A I T N I C S P T Y M N P S A V E L F N - - - - - - - - - - - - N D N N V N W V S T V N V E D F S
gm021519_Glyma0    - - - - - - - - M E N A - T N I C S P T Y M N P S A V E L C N - - - - - - - - - - - - D D N N V N W V S R L N V H D F S
 
AT3G12720.1     S S L L D D E N M I P H W S D V D G M A I H E A P M L P S D K A V V G V D D D D L N M D I L F N T P S - - S S A F D P D
gm043241_Glyma1    A Q T L E E G T Q V - - - - - - Q V Q V Q H E K D K T C E D - - - M G I D V R E A N N G N I E T S A S F E S S N F D F G
gm021519_Glyma0    A Q T L E E G A Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S N F D L G
 
AT3G12720.1     F - A S I F S S A - M S I D F N P M D D L G S W T F
gm043241_Glyma1    L L E S V L T S E F I S Y D F N C M D E L - A W N F
gm021519_Glyma0    F L E S V L T S E F I S H D L N - - - - - - - - - -
 
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