fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12730.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043238 not found in 373aa AT1G79430.2 1st_not 0.427553444 II
Pt035028 not found in 356aa AT1G79430.2 1st_not 0.401425178 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G12730.1     -----------MMQSREE---IRDDSSSGLVLTTDPKPRLRWTTELHERFVDAVTHLGGP
pt035028_POPTR_ ---MFHTKKPSTMNSHDRPMCVQGD--SGLVLTTDPKPRLRWTVELHERFVDAVTQLGGP
gm043238_Glyma1 MERMFPPKKPSTMNSHDRPMCVQGD--SGLVLTTDPKPRLRWTVELHERFVDAVTQLGGP
                            *:*::.   ::.*  ****************.***********:****

AT3G12730.1     EKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEHSQNHSICIRDTNRASMLDLRR
pt035028_POPTR_ DKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFN-DHS--IKD---ASALDLQR
gm043238_Glyma1 DKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFN-DHS--IKDGMRASALELQR
                :************************************:.. :**  *:*   ** *:*:*

AT3G12730.1     NAVFTTSPLIIGRNMNEMQMEVQRRIEEEVVIERQVNQRIAAQGKYMESMLEKACET---
pt035028_POPTR_ SA--ASSSGMMSRSMNEMQMEVQRRLHEQLEVQRHLQLRTEAQGKYIQSLLEKACQTLAG
gm043238_Glyma1 NT--ASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAG
                .:  ::*. ::.*.*****:*****:.*:: :::::: *  *****::*:**** :*   

AT3G12730.1     -QEAS----------------------LTKDYST-LFF----------------------
pt035028_POPTR_ DQNLASGSYKGMG-----NQGIPGMG-AMKEFGT-LNFPAFQDL-NIYGGDQLDLQHNMD
gm043238_Glyma1 -ENMASAATNLKGAIVPHHQGIPDMGVVMKEFGSPLGFSSFQDLENIYGGDQIDLQQNME
                 :: :                        *::.: * *                      

AT3G12730.1     ----D------RTNIC----------NNTSSIPIPWFEDH-------FPSSS--------
pt035028_POPTR_ RPSLD-GFMPNNDNICLGKKRP-SPYDGSGKSPLIWPDDLRLQDLGSGPA--CLEPQDDP
gm043238_Glyma1 KPPLDHGFMPINETLCLGKKRSNNPYSGSGKSPLIWSDDLRLQDLG-GPASSCLGPQDDP
                    *      . .:*          ..:.. *: * :*         *:          

AT3G12730.1     ------------SMDSTLILPDINSNFSLQDSR---------------------------
pt035028_POPTR_ FKGDQIQMAPP-SMDRG---TDLDSISDMYEIKPALQGDALDEKKFEASA-KLKRPSPRR
gm043238_Glyma1 FKGDQIQIAPPGSLDRGA-STDIDPMSEIYDSKPVLQS---EEKKFDASSMKLERPSPRR
                            *:*     .*::.  .: : :                           

AT3G12730.1     --------------SSITKGRTVCLG
pt035028_POPTR_ SPLAAERMSPMINTGAMPQGRNSPFG
gm043238_Glyma1 APLQAERMSPMISTGTMAQGRGSPFG
                              .::.:**   :*
BoxShade v3.31 C (beta, 970507) Output
AT3G12730.1     - - - - - - - - - - - M M Q S R E E - - - I R D D S S S G L V L T T D P K P R L R W T T E L H E R F V D A V T H L G G P
pt035028_POPTR_    - - - M F H T K K P S T M N S H D R P M C V Q G D - - S G L V L T T D P K P R L R W T V E L H E R F V D A V T Q L G G P
gm043238_Glyma1    M E R M F P P K K P S T M N S H D R P M C V Q G D - - S G L V L T T D P K P R L R W T V E L H E R F V D A V T Q L G G P
 
AT3G12730.1     E K A T P K T I M R V M G V K G L T L Y H L K S H L Q K F R L G K Q P H K E H S Q N H S I C I R D T N R A S M L D L R R
pt035028_POPTR_    D K A T P K T I M R V M G V K G L T L Y H L K S H L Q K F R L G K Q P H K D F N - D H S - - I K D - - - A S A L D L Q R
gm043238_Glyma1    D K A T P K T I M R V M G V K G L T L Y H L K S H L Q K F R L G K Q P H K E F N - D H S - - I K D G M R A S A L E L Q R
 
AT3G12730.1     N A V F T T S P L I I G R N M N E M Q M E V Q R R I E E E V V I E R Q V N Q R I A A Q G K Y M E S M L E K A C E T - - -
pt035028_POPTR_    S A - - A S S S G M M S R S M N E M Q M E V Q R R L H E Q L E V Q R H L Q L R T E A Q G K Y I Q S L L E K A C Q T L A G
gm043238_Glyma1    N T - - A S S S A M I G R N M N E M Q I E V Q R R L H E Q L E V Q K H L Q L R I E A Q G K Y M Q S I L E K A Y Q T L A G
 
AT3G12730.1     - Q E A S - - - - - - - - - - - - - - - - - - - - - - L T K D Y S T - L F F - - - - - - - - - - - - - - - - - - - - - -
pt035028_POPTR_    D Q N L A S G S Y K G M G - - - - - N Q G I P G M G - A M K E F G T - L N F P A F Q D L - N I Y G G D Q L D L Q H N M D
gm043238_Glyma1    - E N M A S A A T N L K G A I V P H H Q G I P D M G V V M K E F G S P L G F S S F Q D L E N I Y G G D Q I D L Q Q N M E
 
AT3G12730.1     - - - - D - - - - - - R T N I C - - - - - - - - - - N N T S S I P I P W F E D H - - - - - - - F P S S S - - - - - - - -
pt035028_POPTR_    R P S L D - G F M P N N D N I C L G K K R P - S P Y D G S G K S P L I W P D D L R L Q D L G S G P A - - C L E P Q D D P
gm043238_Glyma1    K P P L D H G F M P I N E T L C L G K K R S N N P Y S G S G K S P L I W S D D L R L Q D L G - G P A S S C L G P Q D D P
 
AT3G12730.1     - - - - - - - - - - - - S M D S T L I L P D I N S N F S L Q D S R - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt035028_POPTR_    F K G D Q I Q M A P P - S M D R G - - - T D L D S I S D M Y E I K P A L Q G D A L D E K K F E A S A - K L K R P S P R R
gm043238_Glyma1    F K G D Q I Q I A P P G S L D R G A - S T D I D P M S E I Y D S K P V L Q S - - - E E K K F D A S S M K L E R P S P R R
 
AT3G12730.1     - - - - - - - - - - - - - - S S I T K G R T V C L G
pt035028_POPTR_    S P L A A E R M S P M I N T G A M P Q G R N S P F G
gm043238_Glyma1    A P L Q A E R M S P M I S T G T M A Q G R G S P F G
 
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