fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12730.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043238 not found in 373aa AT1G79430.2 1st_not 0.427553444 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12730.1     -----------MMQSREE---IRDDSSSGLVLTTDPKPRLRWTTELHERFVDAVTHLGGP
gm043238_Glyma1 MERMFPPKKPSTMNSHDRPMCVQGD--SGLVLTTDPKPRLRWTVELHERFVDAVTQLGGP
                            *:*::.   ::.*  ****************.***********:****

AT3G12730.1     EKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEHSQNHSICIRDTNRASMLDLRR
gm043238_Glyma1 DKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFN-DHS--IKDGMRASALELQR
                :*************************************.. :**  *:*  *** *:*:*

AT3G12730.1     NAVFTTSPLIIGRNMNEMQMEVQRRIEEEVVIERQVNQRIAAQGKYMESMLEKACETQEA
gm043238_Glyma1 NT--ASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAG
                *:  ::*. :*********:*****:.*:: :::::: ** ******:*:**** :*  .

AT3G12730.1     S-------------------------LTKDYS-----TLFFDRTNI--------------
gm043238_Glyma1 ENMASAATNLKGAIVPHHQGIPDMGVVMKEFGSPLGFSSFQDLENIYGGDQIDLQQNMEK
                .                         : *::.     : * *  **              

AT3G12730.1     --------------C------NNTSS----IPIPWFED------HFPSSSSM--------
gm043238_Glyma1 PPLDHGFMPINETLCLGKKRSNNPYSGSGKSPLIWSDDLRLQDLGGPASSCLGPQDDPFK
                              *      **. *     *: * :*        *:**.:        

AT3G12730.1     -DSTLILP----------DINSNFSLQDSR------------------------------
gm043238_Glyma1 GDQIQIAPPGSLDRGASTDIDPMSEIYDSKPVLQSEEKKFDASSMKLERPSPRRAPLQAE
                 *.  * *          **:.  .: **:                              

AT3G12730.1     --------SSITKGRTVCLG
gm043238_Glyma1 RMSPMISTGTMAQGRGSPFG
                        .::::**   :*
BoxShade v3.31 C (beta, 970507) Output
AT3G12730.1     - - - - - - - - - - - M M Q S R E E - - - I R D D S S S G L V L T T D P K P R L R W T T E L H E R F V D A V T H L G G P
gm043238_Glyma1    M E R M F P P K K P S T M N S H D R P M C V Q G D - - S G L V L T T D P K P R L R W T V E L H E R F V D A V T Q L G G P
 
AT3G12730.1     E K A T P K T I M R V M G V K G L T L Y H L K S H L Q K F R L G K Q P H K E H S Q N H S I C I R D T N R A S M L D L R R
gm043238_Glyma1    D K A T P K T I M R V M G V K G L T L Y H L K S H L Q K F R L G K Q P H K E F N - D H S - - I K D G M R A S A L E L Q R
 
AT3G12730.1     N A V F T T S P L I I G R N M N E M Q M E V Q R R I E E E V V I E R Q V N Q R I A A Q G K Y M E S M L E K A C E T Q E A
gm043238_Glyma1    N T - - A S S S A M I G R N M N E M Q I E V Q R R L H E Q L E V Q K H L Q L R I E A Q G K Y M Q S I L E K A Y Q T L A G
 
AT3G12730.1     S - - - - - - - - - - - - - - - - - - - - - - - - - L T K D Y S - - - - - T L F F D R T N I - - - - - - - - - - - - - -
gm043238_Glyma1    E N M A S A A T N L K G A I V P H H Q G I P D M G V V M K E F G S P L G F S S F Q D L E N I Y G G D Q I D L Q Q N M E K
 
AT3G12730.1     - - - - - - - - - - - - - - C - - - - - - N N T S S - - - - I P I P W F E D - - - - - - H F P S S S S M - - - - - - - -
gm043238_Glyma1    P P L D H G F M P I N E T L C L G K K R S N N P Y S G S G K S P L I W S D D L R L Q D L G G P A S S C L G P Q D D P F K
 
AT3G12730.1     - D S T L I L P - - - - - - - - - - D I N S N F S L Q D S R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm043238_Glyma1    G D Q I Q I A P P G S L D R G A S T D I D P M S E I Y D S K P V L Q S E E K K F D A S S M K L E R P S P R R A P L Q A E
 
AT3G12730.1     - - - - - - - - S S I T K G R T V C L G
gm043238_Glyma1    R M S P M I S T G T M A Q G R G S P F G
 
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