fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12730.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm043238 not found in 373aa AT1G79430.2 1st_not 0.427553444 II
Gm021521 not found in 373aa AT1G79430.2 not_not 0.425178147 III
Gm042819 not found in 355aa AT1G79430.2 not_not 0.418052256 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G12730.1     -----------MMQSREE---IRDDSSSGLVLTTDPKPRLRWTTELHERFVDAVTHLGGP
gm043238_Glyma1 MERMFPPKKPSTMNSHDRPMCVQGD--SGLVLTTDPKPRLRWTVELHERFVDAVTQLGGP
gm021521_Glyma0 MERMFPPKKPSTMNSHDRPMCVQGD--SGLVLTTDPKPRLRWTVELHERFVDAVTQLGGP
gm042819_Glyma1 MERMFPPKKPSTMNSHDRSMCVQGD--SGLVLTTDPKPRLRWTVELHERFVDAVAQLGGP
                            *:*::.   ::.*  ****************.**********::****

AT3G12730.1     EKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEHSQNHSICIRDTNRASMLDLRR
gm043238_Glyma1 DKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKEFN-DHS--IKDGMRASALELQR
gm021521_Glyma0 DKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFN-DHS--IKDGMRASALELQR
gm042819_Glyma1 DKATPKTIMRVMGVKGLTLYHLKSHLQKFRLGKQPHKDFN-DHS--IKDGMRASALELQR
                :************************************:.. :**  *:*  *** *:*:*

AT3G12730.1     NAVFTTSPLIIGRNMNEMQMEVQRRIEEEVVIERQVNQRIAAQGKYMESMLEKACETQEA
gm043238_Glyma1 NT--ASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAG
gm021521_Glyma0 NT--ASSSAMIGRNMNEMQIEVQRRLHEQLEVQKHLQLRIEAQGKYMQSILEKAYQTLAG
gm042819_Glyma1 NI--GSSSAMIGRNMNEMQMEVQRRLHEQLEVQKNLQLRIEAQGKYMQSILEKAYHTLAG
                *    :*. :*********:*****:.*:: :::::: ** ******:*:**** .*  .

AT3G12730.1     S-------------------------LTKDYST-L----FFDRTNIC-------------
gm043238_Glyma1 ENMASAATNLKGAIVPHHQGIPDMGVVMKEFGSPLGFSSFQDLENIY--GGDQIDLQQNM
gm021521_Glyma0 ENMASAATNLKSAIVPHHQGIPDMGVVMKEFGSPLGFSSFQDLENIY--GGNQIDLQQNM
gm042819_Glyma1 ENM---ATNMKGMGAP--LGTTEMG-VMKEFGS-LNYPSFQDL-NIYASGDQQLD-----
                .                         : *::.: *    * *  **              

AT3G12730.1     ---------------NNTSSI---------------PIPWFEDH------FPSSSSM---
gm043238_Glyma1 EKPPLDHGFMPI---NETLCLGKKRSNNPYSGSGKSPLIWSDDLRLQDLGGPASSCLGPQ
gm021521_Glyma0 EKPSLDHGFMPI---NESLCLGKKRSNNPYSGSGKNPLIWSDDLRLQDLGGPASSCLGPQ
gm042819_Glyma1 -------GFMPSNNNNETLFVGKKRPNCPYSGSGKSPLIWSDDLRLQDL-GTASSCISPQ
                               *::  :               *: * :*        .:**.:   

AT3G12730.1     ------D-STLILP----------DINSNFSLQDSR------------------------
gm043238_Glyma1 DDPFKGD-QIQIAPPGSLDRGASTDIDPMSEIYDSKPVLQ-----SEEKKFDASSMKLER
gm021521_Glyma0 DDPFKGD-QIQIAPPGSLDRGASTDIDPMSEIYDSKPVLQ-----SEEKKFDASSMKLER
gm042819_Glyma1 DDPFKGDHKVQISPP-------SMDSDPISEIYDTKPMILHGESVSDQNKFDA-SMKVER
                      * .  * *          * :.  .: *::                        

AT3G12730.1     -------------------SSITKGRTVCLG
gm043238_Glyma1 PSPRRAPLQAERMSPMISTGTMAQGRGSPFG
gm021521_Glyma0 PSPRRAPLQPERMSPMISTGTMAQGRGSPFG
gm042819_Glyma1 PSPKRSPLQPDRTSPMINSSSVAQGRSSPFG
                                   .::::**   :*
BoxShade v3.31 C (beta, 970507) Output
AT3G12730.1     - - - - - - - - - - - M M Q S R E E - - - I R D D S S S G L V L T T D P K P R L R W T T E L H E R F V D A V T H L G G P
gm043238_Glyma1    M E R M F P P K K P S T M N S H D R P M C V Q G D - - S G L V L T T D P K P R L R W T V E L H E R F V D A V T Q L G G P
gm021521_Glyma0    M E R M F P P K K P S T M N S H D R P M C V Q G D - - S G L V L T T D P K P R L R W T V E L H E R F V D A V T Q L G G P
gm042819_Glyma1    M E R M F P P K K P S T M N S H D R S M C V Q G D - - S G L V L T T D P K P R L R W T V E L H E R F V D A V A Q L G G P
 
AT3G12730.1     E K A T P K T I M R V M G V K G L T L Y H L K S H L Q K F R L G K Q P H K E H S Q N H S I C I R D T N R A S M L D L R R
gm043238_Glyma1    D K A T P K T I M R V M G V K G L T L Y H L K S H L Q K F R L G K Q P H K E F N - D H S - - I K D G M R A S A L E L Q R
gm021521_Glyma0    D K A T P K T I M R V M G V K G L T L Y H L K S H L Q K F R L G K Q P H K D F N - D H S - - I K D G M R A S A L E L Q R
gm042819_Glyma1    D K A T P K T I M R V M G V K G L T L Y H L K S H L Q K F R L G K Q P H K D F N - D H S - - I K D G M R A S A L E L Q R
 
AT3G12730.1     N A V F T T S P L I I G R N M N E M Q M E V Q R R I E E E V V I E R Q V N Q R I A A Q G K Y M E S M L E K A C E T Q E A
gm043238_Glyma1    N T - - A S S S A M I G R N M N E M Q I E V Q R R L H E Q L E V Q K H L Q L R I E A Q G K Y M Q S I L E K A Y Q T L A G
gm021521_Glyma0    N T - - A S S S A M I G R N M N E M Q I E V Q R R L H E Q L E V Q K H L Q L R I E A Q G K Y M Q S I L E K A Y Q T L A G
gm042819_Glyma1    N I - - G S S S A M I G R N M N E M Q M E V Q R R L H E Q L E V Q K N L Q L R I E A Q G K Y M Q S I L E K A Y H T L A G
 
AT3G12730.1     S - - - - - - - - - - - - - - - - - - - - - - - - - L T K D Y S T - L - - - - F F D R T N I C - - - - - - - - - - - - -
gm043238_Glyma1    E N M A S A A T N L K G A I V P H H Q G I P D M G V V M K E F G S P L G F S S F Q D L E N I Y - - G G D Q I D L Q Q N M
gm021521_Glyma0    E N M A S A A T N L K S A I V P H H Q G I P D M G V V M K E F G S P L G F S S F Q D L E N I Y - - G G N Q I D L Q Q N M
gm042819_Glyma1    E N M - - - A T N M K G M G A P - - L G T T E M G - V M K E F G S - L N Y P S F Q D L - N I Y A S G D Q Q L D - - - - -
 
AT3G12730.1     - - - - - - - - - - - - - - - N N T S S I - - - - - - - - - - - - - - - P I P W F E D H - - - - - - F P S S S S M - - -
gm043238_Glyma1    E K P P L D H G F M P I - - - N E T L C L G K K R S N N P Y S G S G K S P L I W S D D L R L Q D L G G P A S S C L G P Q
gm021521_Glyma0    E K P S L D H G F M P I - - - N E S L C L G K K R S N N P Y S G S G K N P L I W S D D L R L Q D L G G P A S S C L G P Q
gm042819_Glyma1    - - - - - - - G F M P S N N N N E T L F V G K K R P N C P Y S G S G K S P L I W S D D L R L Q D L - G T A S S C I S P Q
 
AT3G12730.1     - - - - - - D - S T L I L P - - - - - - - - - - D I N S N F S L Q D S R - - - - - - - - - - - - - - - - - - - - - - - -
gm043238_Glyma1    D D P F K G D - Q I Q I A P P G S L D R G A S T D I D P M S E I Y D S K P V L Q - - - - - S E E K K F D A S S M K L E R
gm021521_Glyma0    D D P F K G D - Q I Q I A P P G S L D R G A S T D I D P M S E I Y D S K P V L Q - - - - - S E E K K F D A S S M K L E R
gm042819_Glyma1    D D P F K G D H K V Q I S P P - - - - - - - S M D S D P I S E I Y D T K P M I L H G E S V S D Q N K F D A - S M K V E R
 
AT3G12730.1     - - - - - - - - - - - - - - - - - - - S S I T K G R T V C L G
gm043238_Glyma1    P S P R R A P L Q A E R M S P M I S T G T M A Q G R G S P F G
gm021521_Glyma0    P S P R R A P L Q P E R M S P M I S T G T M A Q G R G S P F G
gm042819_Glyma1    P S P K R S P L Q P D R T S P M I N S S S V A Q G R S S P F G
 
0