fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os009372 not found in 340aa AT1G79180.1 1st_not 0.418141592 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12820.1     MGNRRAPCCDKSQVKRGPWSDEESERLRSFILKNGHQNWRSLPKLAGLMRCGKSCRLRWI
Os009372_Os02t0 MGRGRAPCCAKVGLNRGSWTPQEDMRLIAYIQKHGHANWRALPKQAGLLRCGKSCRLRWI
                **. ***** *  ::**.*: :*. ** ::* *:** ***:*** ***:***********

AT3G12820.1     NYLRPGLKRGNFTKEEEDTIIHLHQAYGNKWSKIASNFPGRTDNEIKNVWNTHLKKRLVK
Os009372_Os02t0 NYLRPDLKRGNFTADEEDTIIKLHGLLGNKWSKIASCLPGRTDNEIKNVWNTHLKKRVSQ
                *****.******* :******:**   ********* :*******************: :

AT3G12820.1     RS----------ISSSSSDVTNHSVSSTSSSSSSISSVLQDVIIKSERPNQEEEFGEILV
Os009372_Os02t0 REKPGDTKKKGKAADASDDADAHSPSSSASSSTTTA---------ANNNNSGDTAGE---
                *.           :.:*.*.  ** **::***:: :         ::. *. :  **   

AT3G12820.1     EQMACG------------FE---------VDAPQSLECLFDDSQVPPPISKPDSLQTH--
Os009372_Os02t0 ---QCGTSKEPENVDVSFFEQDIDISDMLVDAPT--EAPLVAAPMPPSPCSSSSLTTTTC
                    **            **         ****   *. :  : :**. ....** *   

AT3G12820.1     -GKSSDH-----------EFWSRL-----IEPGFDDYN------------EWLIFLDN--
Os009372_Os02t0 VGAVSDELLDLPEIDIEPDIWSIIDGYGGDEPGDGDATVPCTASPGEEGAEW--WVENLE
                 *  **.           ::** :      *** .* .            **  :::*  

AT3G12820.1     --------------------QTC------------------------------------
Os009372_Os02t0 KELGLWGPMDESLAHPDPPGQVCYPGPLTETEGDPVSTYFQSGPTASPLQEIASPAVLS
                                    *.*
BoxShade v3.31 C (beta, 970507) Output
AT3G12820.1     M G N R R A P C C D K S Q V K R G P W S D E E S E R L R S F I L K N G H Q N W R S L P K L A G L M R C G K S C R L R W I
Os009372_Os02t0    M G R G R A P C C A K V G L N R G S W T P Q E D M R L I A Y I Q K H G H A N W R A L P K Q A G L L R C G K S C R L R W I
 
AT3G12820.1     N Y L R P G L K R G N F T K E E E D T I I H L H Q A Y G N K W S K I A S N F P G R T D N E I K N V W N T H L K K R L V K
Os009372_Os02t0    N Y L R P D L K R G N F T A D E E D T I I K L H G L L G N K W S K I A S C L P G R T D N E I K N V W N T H L K K R V S Q
 
AT3G12820.1     R S - - - - - - - - - - I S S S S S D V T N H S V S S T S S S S S S I S S V L Q D V I I K S E R P N Q E E E F G E I L V
Os009372_Os02t0    R E K P G D T K K K G K A A D A S D D A D A H S P S S S A S S S T T T A - - - - - - - - - A N N N N S G D T A G E - - -
 
AT3G12820.1     E Q M A C G - - - - - - - - - - - - F E - - - - - - - - - V D A P Q S L E C L F D D S Q V P P P I S K P D S L Q T H - -
Os009372_Os02t0    - - - Q C G T S K E P E N V D V S F F E Q D I D I S D M L V D A P T - - E A P L V A A P M P P S P C S S S S L T T T T C
 
AT3G12820.1     - G K S S D H - - - - - - - - - - - E F W S R L - - - - - I E P G F D D Y N - - - - - - - - - - - - E W L I F L D N - -
Os009372_Os02t0    V G A V S D E L L D L P E I D I E P D I W S I I D G Y G G D E P G D G D A T V P C T A S P G E E G A E W - - W V E N L E
 
AT3G12820.1     - - - - - - - - - - - - - - - - - - - - Q T C - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os009372_Os02t0    K E L G L W G P M D E S L A H P D P P G Q V C Y P G P L T E T E G D P V S T Y F Q S G P T A S P L Q E I A S P A V L S
 
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