fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031258 not found in 445aa AT1G34670.1 1st_not 0.413716814 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12820.1     --------------------------------MGNRRAPCCDKSQVKRGPWSDEESERLR
Sb031258_Sorbi1 EGASLASYPVVAIDRSIEIGPVQCQSRLRRAAMG--RSPCCDENGLKKGPWTQEEDEKLL
                                                **  *:****:. :*:***::**.*:* 

AT3G12820.1     SFILKNGHQNWRSLPKLAGLMRCGKSCRLRWINYLRPGLKRGNFTKEEEDTIIHLHQAYG
Sb031258_Sorbi1 HYIQKNGHGSWRTLPRLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILHLHSVLG
                 :* **** .**:**:**** ********** *****.:***:*::***:**:***.. *

AT3G12820.1     NKWSKIASNFPGRTDNEIKNVWNTHLKKRLVK----------------------------
Sb031258_Sorbi1 NKWSAIATHLPGRTDNEIKNFWNTHLKKRLIQMGFDPMTHRPRTDFFAALPQLIALAALR
                **** **:::**********.*********::                            

AT3G12820.1     -------------------------RSISSSSSDV------------TNHSVSSTSSSSS
Sb031258_Sorbi1 QHLQLGDQQQAAKLQYLQSLLQSAATTISSSDTEAPALGLGAICCSPPQLTTTPLDSCTA
                                          :****.::.            .: :.:. .*.::

AT3G12820.1     SISSVLQDVIIKSERP--NQEEEFGEILVEQMACGFEV------DAPQSLECL--FDDSQ
Sb031258_Sorbi1 PVSSSLLPCTFPEAAPPVSSEEDEANNHQQQQTAGLSSSYGGLGSADDVFACHGGSSSSS
                .:** *    : .  *  ..**: .:   :* :.*:.       .* : : *    ..*.

AT3G12820.1     VPPPISKPDS-----LQTHGK----SSDHEF----------WSRLIEPGFDDY-NEWLIF
Sb031258_Sorbi1 LPPLTDLSDAHAGSLLQVDGSMRSATASSSFGGGSSCSPLPWPELFFPDDDPFITDFL--
                :**  . .*:     **..*.    ::. .*          *..*: *. * : .::*  

AT3G12820.1     LDNQTC
Sb031258_Sorbi1 ------
BoxShade v3.31 C (beta, 970507) Output
AT3G12820.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G N R R A P C C D K S Q V K R G P W S D E E S E R L R
Sb031258_Sorbi1    E G A S L A S Y P V V A I D R S I E I G P V Q C Q S R L R R A A M G - - R S P C C D E N G L K K G P W T Q E E D E K L L
 
AT3G12820.1     S F I L K N G H Q N W R S L P K L A G L M R C G K S C R L R W I N Y L R P G L K R G N F T K E E E D T I I H L H Q A Y G
Sb031258_Sorbi1    H Y I Q K N G H G S W R T L P R L A G L N R C G K S C R L R W T N Y L R P D I K R G K F S Q E E E Q T I L H L H S V L G
 
AT3G12820.1     N K W S K I A S N F P G R T D N E I K N V W N T H L K K R L V K - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb031258_Sorbi1    N K W S A I A T H L P G R T D N E I K N F W N T H L K K R L I Q M G F D P M T H R P R T D F F A A L P Q L I A L A A L R
 
AT3G12820.1     - - - - - - - - - - - - - - - - - - - - - - - - - R S I S S S S S D V - - - - - - - - - - - - T N H S V S S T S S S S S
Sb031258_Sorbi1    Q H L Q L G D Q Q Q A A K L Q Y L Q S L L Q S A A T T I S S S D T E A P A L G L G A I C C S P P Q L T T T P L D S C T A
 
AT3G12820.1     S I S S V L Q D V I I K S E R P - - N Q E E E F G E I L V E Q M A C G F E V - - - - - - D A P Q S L E C L - - F D D S Q
Sb031258_Sorbi1    P V S S S L L P C T F P E A A P P V S S E E D E A N N H Q Q Q Q T A G L S S S Y G G L G S A D D V F A C H G G S S S S S
 
AT3G12820.1     V P P P I S K P D S - - - - - L Q T H G K - - - - S S D H E F - - - - - - - - - - W S R L I E P G F D D Y - N E W L I F
Sb031258_Sorbi1    L P P L T D L S D A H A G S L L Q V D G S M R S A T A S S S F G G G S S C S P L P W P E L F F P D D D P F I T D F L - -
 
AT3G12820.1     L D N Q T C
Sb031258_Sorbi1    - - - - - -
 
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