fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12977.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036291 not found in 302aa AT1G56010.2 1st_not 0.507718696 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12977.1     MEETEKNKGSISMVEANLPPGFRFHPRDDELVCDYLMRRTVRSLYQPVVLIDVDLNKCEP
pt036291_POPTR_ -------MSNISFVEAKLPPGFRFHPRDEELVCDYLMKKA--SHCDSLLMIEVDLNKCEP
                        ..**:***:***********:********:::  *  :.:::*:********

AT3G12977.1     WDIPQTARVGGKEWYFYSQKDRKYATGYRTNRATATGYWKATGKDRAIQRNGGLVGMRKT
pt036291_POPTR_ WDIPETACVGGKEWYFYSQRDRKYATGLRTNRATASGYWKATGKDRHILRKGTLVGMRKT
                ****:** ***********:******* *******:********** * *:* *******

AT3G12977.1     LVFYRGRSPKGRKTDWVMHEFRLQGKLLHHSPNSLEEEWVLCRVFHKNSNGADIDDITRS
pt036291_POPTR_ LVFYQGRAPKGKKTDWVMHEFRLEGPLGQPKTSSEKEDWVLCRVFYKNTREVVAKPSIRS
                ****:**:***:***********:* * : ...* :*:*******:**:. .  .   **

AT3G12977.1     CSDATAS----AFMDSYINFDHHHI-INQH--VPCFSNNLSHNQTNQS----------GL
pt036291_POPTR_ CYDDTGSSSLPALMDSYITFDQTQPNLDEHEQVPCFS-IFSQIQTNQNFPYITQMEVPNL
                * * *.*    *:*****.**: :  :::*  *****  :*: ****.          .*

AT3G12977.1     ISKNSSPLFNASP------------DQMILRTLLSQL-----TKKVEESQSRGDGSSESQ
pt036291_POPTR_ PTKGTGP-FGQVPMNITTHSDAFSCDTKVLKAVLNHFNMMESNANIKGSPSLGEGSSESY
                 :*.:.* *.  *            *  :*:::*.::     . ::: * * *:***** 

AT3G12977.1     LTDIGIPSHAWNY-
pt036291_POPTR_ LSDVGMPN-LWNHY
                *:*:*:*.  **:
BoxShade v3.31 C (beta, 970507) Output
AT3G12977.1     M E E T E K N K G S I S M V E A N L P P G F R F H P R D D E L V C D Y L M R R T V R S L Y Q P V V L I D V D L N K C E P
pt036291_POPTR_    - - - - - - - M S N I S F V E A K L P P G F R F H P R D E E L V C D Y L M K K A - - S H C D S L L M I E V D L N K C E P
 
AT3G12977.1     W D I P Q T A R V G G K E W Y F Y S Q K D R K Y A T G Y R T N R A T A T G Y W K A T G K D R A I Q R N G G L V G M R K T
pt036291_POPTR_    W D I P E T A C V G G K E W Y F Y S Q R D R K Y A T G L R T N R A T A S G Y W K A T G K D R H I L R K G T L V G M R K T
 
AT3G12977.1     L V F Y R G R S P K G R K T D W V M H E F R L Q G K L L H H S P N S L E E E W V L C R V F H K N S N G A D I D D I T R S
pt036291_POPTR_    L V F Y Q G R A P K G K K T D W V M H E F R L E G P L G Q P K T S S E K E D W V L C R V F Y K N T R E V V A K P S I R S
 
AT3G12977.1     C S D A T A S - - - - A F M D S Y I N F D H H H I - I N Q H - - V P C F S N N L S H N Q T N Q S - - - - - - - - - - G L
pt036291_POPTR_    C Y D D T G S S S L P A L M D S Y I T F D Q T Q P N L D E H E Q V P C F S - I F S Q I Q T N Q N F P Y I T Q M E V P N L
 
AT3G12977.1     I S K N S S P L F N A S P - - - - - - - - - - - - D Q M I L R T L L S Q L - - - - - T K K V E E S Q S R G D G S S E S Q
pt036291_POPTR_    P T K G T G P - F G Q V P M N I T T H S D A F S C D T K V L K A V L N H F N M M E S N A N I K G S P S L G E G S S E S Y
 
AT3G12977.1     L T D I G I P S H A W N Y -
pt036291_POPTR_    L S D V G M P N - L W N H Y
 
0