fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12977.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb034185 not found in 458aa AT1G56010.2 1st_not 0.409948542 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12977.1     -------MEETEKN--------------------KGSISMVEANLPPGFRFHPRDDELVC
Sb034185_Sorbi1 RGRGRGVLLEIDRSIELCVCARALLAARDDDAMAINSLSMVEARLPPGFRFHPRDDELVL
                       : * ::.                     .*:*****.*************** 

AT3G12977.1     DYLMRR-----------TVRSLYQPVVLIDVDLNKCEPWDIPQTARVGGKEWYFYSQKDR
Sb034185_Sorbi1 DYLAKKLAGGAGVGGGPLVVSIYGCPAMVDVDLNKCEPWDLPEIACIGGKEWYFYSLRDR
                *** ::            * *:*   .::***********:*: * :********* :**

AT3G12977.1     KYATGYRTNRATATGYWKATGKDRAIQRNGGLVGMRKTLVFYRGRSPKGRKTDWVMHEFR
Sb034185_Sorbi1 KYATGQRTNRATDSGYWKATGKDRPISRKGLLVGMRKTLVFYQGRAPKGKKTEWVMHEFR
                ***** ****** :**********.*.*:* ***********:**:***:**:*******

AT3G12977.1     LQGKLLHHSPNSL--EEEWVLCRVFHK-----------NSNGADIDDITRSCSDATASAF
Sb034185_Sorbi1 MEGQ---GDPMKLPFKEDWVLCRVFYKSRATVAKPPTESSSSFNIDAATTSLPPLIDNNY
                ::*:    .* .*  :*:*******:*           .*.. :**  * * .    . :

AT3G12977.1     MDSYINFDH--HHIIN----QHVPCFSNNLSHNQTNQSGLISKNSSPLFNAS----PDQ-
Sb034185_Sorbi1 ---NISFDQPGSSVQNLEGYEQVPCFS-------SNPSQLSSSINAPLSSAATMADPEQH
                    *.**:    : *    ::*****       :* * * *. .:** .*:    *:* 

AT3G12977.1     ----MILRTLLSQLTK------KVEESQSRGDGSSESQLTDIGIPSHAWNY--
Sb034185_Sorbi1 MGKSIIKDVLMSQFSRFEAGNVKREAPQSNFSQDGFEYLAESGF-TQMWNSFN
                    :*  .*:**:::      * * .**. . .. . *:: *: :: **
BoxShade v3.31 C (beta, 970507) Output
AT3G12977.1     - - - - - - - M E E T E K N - - - - - - - - - - - - - - - - - - - - K G S I S M V E A N L P P G F R F H P R D D E L V C
Sb034185_Sorbi1    R G R G R G V L L E I D R S I E L C V C A R A L L A A R D D D A M A I N S L S M V E A R L P P G F R F H P R D D E L V L
 
AT3G12977.1     D Y L M R R - - - - - - - - - - - T V R S L Y Q P V V L I D V D L N K C E P W D I P Q T A R V G G K E W Y F Y S Q K D R
Sb034185_Sorbi1    D Y L A K K L A G G A G V G G G P L V V S I Y G C P A M V D V D L N K C E P W D L P E I A C I G G K E W Y F Y S L R D R
 
AT3G12977.1     K Y A T G Y R T N R A T A T G Y W K A T G K D R A I Q R N G G L V G M R K T L V F Y R G R S P K G R K T D W V M H E F R
Sb034185_Sorbi1    K Y A T G Q R T N R A T D S G Y W K A T G K D R P I S R K G L L V G M R K T L V F Y Q G R A P K G K K T E W V M H E F R
 
AT3G12977.1     L Q G K L L H H S P N S L - - E E E W V L C R V F H K - - - - - - - - - - - N S N G A D I D D I T R S C S D A T A S A F
Sb034185_Sorbi1    M E G Q - - - G D P M K L P F K E D W V L C R V F Y K S R A T V A K P P T E S S S S F N I D A A T T S L P P L I D N N Y
 
AT3G12977.1     M D S Y I N F D H - - H H I I N - - - - Q H V P C F S N N L S H N Q T N Q S G L I S K N S S P L F N A S - - - - P D Q -
Sb034185_Sorbi1    - - - N I S F D Q P G S S V Q N L E G Y E Q V P C F S - - - - - - - S N P S Q L S S S I N A P L S S A A T M A D P E Q H
 
AT3G12977.1     - - - - M I L R T L L S Q L T K - - - - - - K V E E S Q S R G D G S S E S Q L T D I G I P S H A W N Y - -
Sb034185_Sorbi1    M G K S I I K D V L M S Q F S R F E A G N V K R E A P Q S N F S Q D G F E Y L A E S G F - T Q M W N S F N
 
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