fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12977.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021624 not found in 302aa AT1G56010.2 1st_not 0.504288164 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G12977.1     MEETEKNKGSISMVEANLPPGFRFHPRDDELVCDYLMRRTVRSLYQPVVLIDVDLNKCEP
gm021624_Glyma0 -------MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVQHN--DSLLLIDVDLNKCEP
                        ..******:***********:********::. :.  :.::***********

AT3G12977.1     WDIPQTARVGGKEWYFYSQKDRKYATGYRTNRATATGYWKATGKDRAIQRNGGLVGMRKT
gm021624_Glyma0 WDIPETACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKGTHVGMRKT
                ****:** *********:*:******* *******:**********.* *:*  ******

AT3G12977.1     LVFYRGRSPKGRKTDWVMHEFRLQGKLLHHSP---NSLEEEWVLCRVFHKNSN-------
gm021624_Glyma0 LVFYQGRAPKGRKTEWVMHEFRIEGP---HGPPKISSSKEDWVLCRVFYKNSEVLAKPSM
                ****:**:******:*******::*    *.*   .* :*:*******:***:       

AT3G12977.1     GADIDDITRSCSDATASAFMDSYINFDH---HHIINQHVPCFSNNLSHNQTNQSGLISKN
gm021624_Glyma0 GSCYEDTGSS----TLPALMDSYISFDQTQTHADEFEQVPCFS-IFSQNQTN--------
                *:  :*   *    * .*:*****.**:   *    ::*****  :*:****        

AT3G12977.1     SSPLFN------------------------------ASPDQMILRTLLSQLTK-------
gm021624_Glyma0 --PIFNHMTTMEPKFPLNHATTTYGGAPNLGYCLDPLSCDRKMLKAVLNQITKMERNPLN
                  *:**                               * *: :*:::*.*:**       

AT3G12977.1     -KVEESQSRGDGSSESQLTDIGIPSHAWNY
gm021624_Glyma0 QSLKGSPSLGEGSSESYLSEVGMP-HVWNY
                 .:: * * *:***** *:::*:* *.***
BoxShade v3.31 C (beta, 970507) Output
AT3G12977.1     M E E T E K N K G S I S M V E A N L P P G F R F H P R D D E L V C D Y L M R R T V R S L Y Q P V V L I D V D L N K C E P
gm021624_Glyma0    - - - - - - - M S N I S M V E A K L P P G F R F H P R D E E L V C D Y L M K K V Q H N - - D S L L L I D V D L N K C E P
 
AT3G12977.1     W D I P Q T A R V G G K E W Y F Y S Q K D R K Y A T G Y R T N R A T A T G Y W K A T G K D R A I Q R N G G L V G M R K T
gm021624_Glyma0    W D I P E T A C V G G K E W Y F Y T Q R D R K Y A T G L R T N R A T A S G Y W K A T G K D R P I L R K G T H V G M R K T
 
AT3G12977.1     L V F Y R G R S P K G R K T D W V M H E F R L Q G K L L H H S P - - - N S L E E E W V L C R V F H K N S N - - - - - - -
gm021624_Glyma0    L V F Y Q G R A P K G R K T E W V M H E F R I E G P - - - H G P P K I S S S K E D W V L C R V F Y K N S E V L A K P S M
 
AT3G12977.1     G A D I D D I T R S C S D A T A S A F M D S Y I N F D H - - - H H I I N Q H V P C F S N N L S H N Q T N Q S G L I S K N
gm021624_Glyma0    G S C Y E D T G S S - - - - T L P A L M D S Y I S F D Q T Q T H A D E F E Q V P C F S - I F S Q N Q T N - - - - - - - -
 
AT3G12977.1     S S P L F N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A S P D Q M I L R T L L S Q L T K - - - - - - -
gm021624_Glyma0    - - P I F N H M T T M E P K F P L N H A T T T Y G G A P N L G Y C L D P L S C D R K M L K A V L N Q I T K M E R N P L N
 
AT3G12977.1     - K V E E S Q S R G D G S S E S Q L T D I G I P S H A W N Y
gm021624_Glyma0    Q S L K G S P S L G E G S S E S Y L S E V G M P - H V W N Y
 
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