fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G12977.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021624 not found in 302aa AT1G56010.2 1st_not 0.504288164 II
Gm043144 not found in 303aa AT1G56010.2 not_not 0.497427101 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G12977.1     MEETEKNKGSISMVEANLPPGFRFHPRDDELVCDYLMRRTVRSLYQPVVLIDVDLNKCEP
gm021624_Glyma0 -------MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVQHN--DSLLLIDVDLNKCEP
gm043144_Glyma1 -------MSNISMVEAKLPPGFRFHPRDEELVCDYLMKKVAHN--DSLLMINVDLNKCEP
                        ..******:***********:********::. :.  :.:::*:********

AT3G12977.1     WDIPQTARVGGKEWYFYSQKDRKYATGYRTNRATATGYWKATGKDRAIQRNGGLVGMRKT
gm021624_Glyma0 WDIPETACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRPILRKGTHVGMRKT
gm043144_Glyma1 WDIPETACVGGKEWYFYTQRDRKYATGLRTNRATASGYWKATGKDRSILRKGTLVGMRKT
                ****:** *********:*:******* *******:**********.* *:*  ******

AT3G12977.1     LVFYRGRSPKGRKTDWVMHEFRLQGKLLHHSP---NSLEEEWVLCRVFHKNSNGADIDDI
gm021624_Glyma0 LVFYQGRAPKGRKTEWVMHEFRIEGP---HGPPKISSSKEDWVLCRVFYKNSEVLAKPSM
gm043144_Glyma1 LVFYQGRAPKGNKTEWVMHEFRIEGP---HGPPKISSSKEDWVLCRVFYKNREVSAKPRM
                ****:**:***.**:*******::*    *.*   .* :*:*******:** :      :

AT3G12977.1     TRSCSDATAS----AFMDSYINFDH---HHIINQHVPCFSNNLSHNQTNQSGLISKNSSP
gm021624_Glyma0 G-SCYEDTGSSTLPALMDSYISFDQTQTHADEFEQVPCFS-IFSQNQTN----------P
gm043144_Glyma1 G-SCYEDTGSSSLPALMDSYISFDQTQTHADEFEQVPCFS-IFSQNQTS----------P
                  ** : *.*    *:*****.**:   *    ::*****  :*:***.          *

AT3G12977.1     LFN------------------------------ASPDQMILRTLLSQLTK--------KV
gm021624_Glyma0 IFNHMTTMEPKFPLNHATTTYGGAPNLGYCLDPLSCDRKMLKAVLNQITKMERNPLNQSL
gm043144_Glyma1 IFNHMATMEPKLPANHATNAYGGAPNLGYCLDPLSCDRKMLKAVLNQITKMERNPLNQSL
                :**                               * *: :*:::*.*:**        .:

AT3G12977.1     EESQSRGDGSSESQLTDIGIPSHAWNY-
gm021624_Glyma0 KGSPSLGEGSSESYLSEVGMP-HVWNY-
gm043144_Glyma1 KGSPSLGEGSSESYLSEVGMP-HMWNNY
                : * * *:***** *:::*:* * **
BoxShade v3.31 C (beta, 970507) Output
AT3G12977.1     M E E T E K N K G S I S M V E A N L P P G F R F H P R D D E L V C D Y L M R R T V R S L Y Q P V V L I D V D L N K C E P
gm021624_Glyma0    - - - - - - - M S N I S M V E A K L P P G F R F H P R D E E L V C D Y L M K K V Q H N - - D S L L L I D V D L N K C E P
gm043144_Glyma1    - - - - - - - M S N I S M V E A K L P P G F R F H P R D E E L V C D Y L M K K V A H N - - D S L L M I N V D L N K C E P
 
AT3G12977.1     W D I P Q T A R V G G K E W Y F Y S Q K D R K Y A T G Y R T N R A T A T G Y W K A T G K D R A I Q R N G G L V G M R K T
gm021624_Glyma0    W D I P E T A C V G G K E W Y F Y T Q R D R K Y A T G L R T N R A T A S G Y W K A T G K D R P I L R K G T H V G M R K T
gm043144_Glyma1    W D I P E T A C V G G K E W Y F Y T Q R D R K Y A T G L R T N R A T A S G Y W K A T G K D R S I L R K G T L V G M R K T
 
AT3G12977.1     L V F Y R G R S P K G R K T D W V M H E F R L Q G K L L H H S P - - - N S L E E E W V L C R V F H K N S N G A D I D D I
gm021624_Glyma0    L V F Y Q G R A P K G R K T E W V M H E F R I E G P - - - H G P P K I S S S K E D W V L C R V F Y K N S E V L A K P S M
gm043144_Glyma1    L V F Y Q G R A P K G N K T E W V M H E F R I E G P - - - H G P P K I S S S K E D W V L C R V F Y K N R E V S A K P R M
 
AT3G12977.1     T R S C S D A T A S - - - - A F M D S Y I N F D H - - - H H I I N Q H V P C F S N N L S H N Q T N Q S G L I S K N S S P
gm021624_Glyma0    G - S C Y E D T G S S T L P A L M D S Y I S F D Q T Q T H A D E F E Q V P C F S - I F S Q N Q T N - - - - - - - - - - P
gm043144_Glyma1    G - S C Y E D T G S S S L P A L M D S Y I S F D Q T Q T H A D E F E Q V P C F S - I F S Q N Q T S - - - - - - - - - - P
 
AT3G12977.1     L F N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A S P D Q M I L R T L L S Q L T K - - - - - - - - K V
gm021624_Glyma0    I F N H M T T M E P K F P L N H A T T T Y G G A P N L G Y C L D P L S C D R K M L K A V L N Q I T K M E R N P L N Q S L
gm043144_Glyma1    I F N H M A T M E P K L P A N H A T N A Y G G A P N L G Y C L D P L S C D R K M L K A V L N Q I T K M E R N P L N Q S L
 
AT3G12977.1     E E S Q S R G D G S S E S Q L T D I G I P S H A W N Y -
gm021624_Glyma0    K G S P S L G E G S S E S Y L S E V G M P - H V W N Y -
gm043144_Glyma1    K G S P S L G E G S S E S Y L S E V G M P - H M W N N Y
 
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