fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G13350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009597 not found in 313aa AT3G13350.1 1st_1st 0.437013996 Ia
Gm016849 not found in 339aa AT3G13350.1 not_1st 0.423017107 II
Pt024254 not found in 316aa AT3G13350.1 1st_1st 0.499222395 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G13350.1     ---------MSTDISPPYSQTHVEPVNG-------------YPSDNKRCDDSSVPAKYDD
gm009597_Glyma0 MNVTNKPNPDGST-NGFQSQLQVQQQNGWEQGSSRLRPTKPYPAPT---------ARYQD
pt024254_POPTR_ ---MSTLDPTATVISPQQQELHSESING--------QSFRSYPPAT---------AKYED
gm016849_Glyma0 MNVTNKPNPYGST-NGFQSLL---QQNGWEQGSSRLRPTKLYPAPT---------ARYQD
                          .:  .   .       **             **. .         *:*:*

AT3G13350.1     LVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKWKEV
gm009597_Glyma0 IVRDANLFWGTLQAFHKILGTKYKVATVGGTSLDLHRLFVEVTSRGGIEKVIVDRKWKEV
pt024254_POPTR_ IAQSSDLFWEKLKAFHQSFGTKFMVPTVGGKALDLHHLFVEVTSRGGIEKVITDRKWKEV
gm016849_Glyma0 IVRDANLFWGTLQAFHKTLGTKYKISTVGGTPLDLHRLFVEVTSRGGIEKVIVDRKWKEV
                :.:.: *** .*:**    ...  :.****..****:**:*********:*: *******

AT3G13350.1     IGAFSFPTTITSASFVLRKYYLKFLFQLEHVYYLEKPVSSLQSTDEAL--KSLANESPNP
gm009597_Glyma0 ILTFNFKDTITSASFVVRKSYLSMLYHYEQVYYFGRQGIPPPTP----------------
pt024254_POPTR_ ITAFNFPTTITSASFVLRKHYLSLLYHFEQVYHFNKQ-IPLVSGTDAMNGRSLVNGSATL
gm016849_Glyma0 ILTFNFKDTITNASFMVRKSYLSMLYHFEQVYYFGRQGIPPTTPDLMIRGQSCQPYSSTT
                * :*.*  ***.***::** **.:*:: *:**:: :   .  :                 

AT3G13350.1     --EEG--------IDEPQVGYE-VQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQTPSQ
gm009597_Glyma0 -------------GTPVQAHDDMVSGTIDAKFDGGYVVTVILGSEQLKGVLFHVPDNVSQ
pt024254_POPTR_ --EEGAITNQFSSSQQLQIGCS-VSGIIDGKFDNGYLVTVNLGTNQLKGVLYHIP----H
gm016849_Glyma0 IPEVAAVNDSPVQSTPVQAHDDMVSGTIDAKFDVGYVVTVTLGSEQLQGVLFHVPDNVSQ
                                 *   . *.* **.*** **:**: **:::*:***:*:*    :

AT3G13350.1     SQQTMETPSAIVQ---SSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHG
gm009597_Glyma0 SSHAEGTSSSQNLGDGTSNSQSRKRAKYAPRDPFRPKSNRSGYNFFFAENYARLKPSYHG
pt024254_POPTR_ TFHESQDSRSSDL----PPRRRRKRSRLALRDPSQPKSNRSGYNFFFTEHYAQLKPLHHG
gm016849_Glyma0 SSHAEGTSSSQNLGDDTSNLQSRKRAKYAPRDPFRPKSNRSGYNFFFAENYARLKPSYHG
                : :    . :       .  : **::: *  *. :**.:********:*:**:*** :**

AT3G13350.1     QERSITKKIGHMWSNLTESEKQVYQDKGVKDVERYRIEMLEYKSSHESGATASTVAQ
gm009597_Glyma0 QERAISKRIGFLWNNLSEAERQVYQEKGMRDKERYRTELMEYKSNNSTPN-----AQ
pt024254_POPTR_ QEKVISKKIGLLWNNLTEAEKQVYQEKGLRDKEKYRNEMLEYRSSYAQ---------
gm016849_Glyma0 QERAISKRIGFLWNNLSEAERQVYQEKGIRDKERYRTELMEYKSNNSTPN-----AQ
                **: *:*:** :*.**:*:*:****:**::* *:** *::**:*.
BoxShade v3.31 C (beta, 970507) Output
AT3G13350.1     - - - - - - - - - M S T D I S P P Y S Q T H V E P V N G - - - - - - - - - - - - - Y P S D N K R C D D S S V P A K Y D D
gm009597_Glyma0    M N V T N K P N P D G S T - N G F Q S Q L Q V Q Q Q N G W E Q G S S R L R P T K P Y P A P T - - - - - - - - - A R Y Q D
pt024254_POPTR_    - - - M S T L D P T A T V I S P Q Q Q E L H S E S I N G - - - - - - - - Q S F R S Y P P A T - - - - - - - - - A K Y E D
gm016849_Glyma0    M N V T N K P N P Y G S T - N G F Q S L L - - - Q Q N G W E Q G S S R L R P T K L Y P A P T - - - - - - - - - A R Y Q D
 
AT3G13350.1     L V R N S A L F W E K L R A F L G L T S K T L K V P T V G G N T L D L H R L F I E V T S R G G I E R V V K D R K W K E V
gm009597_Glyma0    I V R D A N L F W G T L Q A F H K I L G T K Y K V A T V G G T S L D L H R L F V E V T S R G G I E K V I V D R K W K E V
pt024254_POPTR_    I A Q S S D L F W E K L K A F H Q S F G T K F M V P T V G G K A L D L H H L F V E V T S R G G I E K V I T D R K W K E V
gm016849_Glyma0    I V R D A N L F W G T L Q A F H K T L G T K Y K I S T V G G T P L D L H R L F V E V T S R G G I E K V I V D R K W K E V
 
AT3G13350.1     I G A F S F P T T I T S A S F V L R K Y Y L K F L F Q L E H V Y Y L E K P V S S L Q S T D E A L - - K S L A N E S P N P
gm009597_Glyma0    I L T F N F K D T I T S A S F V V R K S Y L S M L Y H Y E Q V Y Y F G R Q G I P P P T P - - - - - - - - - - - - - - - -
pt024254_POPTR_    I T A F N F P T T I T S A S F V L R K H Y L S L L Y H F E Q V Y H F N K Q - I P L V S G T D A M N G R S L V N G S A T L
gm016849_Glyma0    I L T F N F K D T I T N A S F M V R K S Y L S M L Y H F E Q V Y Y F G R Q G I P P T T P D L M I R G Q S C Q P Y S S T T
 
AT3G13350.1     - - E E G - - - - - - - - I D E P Q V G Y E - V Q G F I D G K F D S G Y L V T M K L G S Q E L K G V L Y H I P Q T P S Q
gm009597_Glyma0    - - - - - - - - - - - - - G T P V Q A H D D M V S G T I D A K F D G G Y V V T V I L G S E Q L K G V L F H V P D N V S Q
pt024254_POPTR_    - - E E G A I T N Q F S S S Q Q L Q I G C S - V S G I I D G K F D N G Y L V T V N L G T N Q L K G V L Y H I P - - - - H
gm016849_Glyma0    I P E V A A V N D S P V Q S T P V Q A H D D M V S G T I D A K F D V G Y V V T V T L G S E Q L Q G V L F H V P D N V S Q
 
AT3G13350.1     S Q Q T M E T P S A I V Q - - - S S Q R R H R K K S K L A V V D T Q K P K C H R S G Y N F F F A E Q Y A R L K P E Y H G
gm009597_Glyma0    S S H A E G T S S S Q N L G D G T S N S Q S R K R A K Y A P R D P F R P K S N R S G Y N F F F A E N Y A R L K P S Y H G
pt024254_POPTR_    T F H E S Q D S R S S D L - - - - P P R R R R K R S R L A L R D P S Q P K S N R S G Y N F F F T E H Y A Q L K P L H H G
gm016849_Glyma0    S S H A E G T S S S Q N L G D D T S N L Q S R K R A K Y A P R D P F R P K S N R S G Y N F F F A E N Y A R L K P S Y H G
 
AT3G13350.1     Q E R S I T K K I G H M W S N L T E S E K Q V Y Q D K G V K D V E R Y R I E M L E Y K S S H E S G A T A S T V A Q
gm009597_Glyma0    Q E R A I S K R I G F L W N N L S E A E R Q V Y Q E K G M R D K E R Y R T E L M E Y K S N N S T P N - - - - - A Q
pt024254_POPTR_    Q E K V I S K K I G L L W N N L T E A E K Q V Y Q E K G L R D K E K Y R N E M L E Y R S S Y A Q - - - - - - - - -
gm016849_Glyma0    Q E R A I S K R I G F L W N N L S E A E R Q V Y Q E K G I R D K E R Y R T E L M E Y K S N N S T P N - - - - - A Q
 
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