fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G13350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt024254 not found in 316aa AT3G13350.1 1st_1st 0.499222395 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G13350.1     ------MSTDISPPYSQTHVEPVNG-----YPSDNKRCDDSSVPAKYDDLVRNSALFWEK
pt024254_POPTR_ MSTLDPTATVISPQQQELHSESINGQSFRSYP---------PATAKYEDIAQSSDLFWEK
                       :* ***  .: * *.:**     **         ...***:*:.:.* *****

AT3G13350.1     LRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKWKEVIGAFSFPTTIT
pt024254_POPTR_ LKAFHQSFGTKFMVPTVGGKALDLHHLFVEVTSRGGIEKVITDRKWKEVITAFNFPTTIT
                *:**    ...: ******::****:**:*********:*:.******** **.******

AT3G13350.1     SASFVLRKYYLKFLFQLEHVYYLEKPVSSLQSTDEAL--KSLANESPNPEEGI-------
pt024254_POPTR_ SASFVLRKHYLSLLYHFEQVYHFNKQIPLVSGTD-AMNGRSLVNGSATLEEGAITNQFSS
                ********:**.:*:::*:**:::* :. :..** *:  :**.* *.. ***        

AT3G13350.1     -DEPQVGYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQT--PSQSQQTMETPSAIV
pt024254_POPTR_ SQQLQIGCSVSGIIDGKFDNGYLVTVNLGTNQLKGVLYHIPHTFHESQDSRSSDLPP---
                 :: *:* .*.*:******.*****::**:::*********:*   **..:: : *.   

AT3G13350.1     QSSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSN
pt024254_POPTR_ ----RRRRKRSRLALRDPSQPKSNRSGYNFFFTEHYAQLKPLHHGQEKVISKKIGLLWNN
                    **:**:*:**: *..:**.:********:*:**:*** :****: *:**** :*.*

AT3G13350.1     LTESEKQVYQDKGVKDVERYRIEMLEYKSSHESGATASTVAQ
pt024254_POPTR_ LTEAEKQVYQEKGLRDKEKYRNEMLEYRSSY---------AQ
                ***:******:**::* *:** *****:**:         **
BoxShade v3.31 C (beta, 970507) Output
AT3G13350.1     - - - - - - M S T D I S P P Y S Q T H V E P V N G - - - - - Y P S D N K R C D D S S V P A K Y D D L V R N S A L F W E K
pt024254_POPTR_    M S T L D P T A T V I S P Q Q Q E L H S E S I N G Q S F R S Y P - - - - - - - - - P A T A K Y E D I A Q S S D L F W E K
 
AT3G13350.1     L R A F L G L T S K T L K V P T V G G N T L D L H R L F I E V T S R G G I E R V V K D R K W K E V I G A F S F P T T I T
pt024254_POPTR_    L K A F H Q S F G T K F M V P T V G G K A L D L H H L F V E V T S R G G I E K V I T D R K W K E V I T A F N F P T T I T
 
AT3G13350.1     S A S F V L R K Y Y L K F L F Q L E H V Y Y L E K P V S S L Q S T D E A L - - K S L A N E S P N P E E G I - - - - - - -
pt024254_POPTR_    S A S F V L R K H Y L S L L Y H F E Q V Y H F N K Q I P L V S G T D - A M N G R S L V N G S A T L E E G A I T N Q F S S
 
AT3G13350.1     - D E P Q V G Y E V Q G F I D G K F D S G Y L V T M K L G S Q E L K G V L Y H I P Q T - - P S Q S Q Q T M E T P S A I V
pt024254_POPTR_    S Q Q L Q I G C S V S G I I D G K F D N G Y L V T V N L G T N Q L K G V L Y H I P H T F H E S Q D S R S S D L P P - - -
 
AT3G13350.1     Q S S Q R R H R K K S K L A V V D T Q K P K C H R S G Y N F F F A E Q Y A R L K P E Y H G Q E R S I T K K I G H M W S N
pt024254_POPTR_    - - - - R R R R K R S R L A L R D P S Q P K S N R S G Y N F F F T E H Y A Q L K P L H H G Q E K V I S K K I G L L W N N
 
AT3G13350.1     L T E S E K Q V Y Q D K G V K D V E R Y R I E M L E Y K S S H E S G A T A S T V A Q
pt024254_POPTR_    L T E A E K Q V Y Q E K G L R D K E K Y R N E M L E Y R S S Y - - - - - - - - - A Q
 
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