Input
| Putative repression domain
|
|
AT3G13350.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt024254 |
not found in 316aa |
AT3G13350.1 |
1st_1st |
0.499222395 |
Ia |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G13350.1 ------MSTDISPPYSQTHVEPVNG-----YPSDNKRCDDSSVPAKYDDLVRNSALFWEK
pt024254_POPTR_ MSTLDPTATVISPQQQELHSESINGQSFRSYP---------PATAKYEDIAQSSDLFWEK
:* *** .: * *.:** ** ...***:*:.:.* *****
AT3G13350.1 LRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKWKEVIGAFSFPTTIT
pt024254_POPTR_ LKAFHQSFGTKFMVPTVGGKALDLHHLFVEVTSRGGIEKVITDRKWKEVITAFNFPTTIT
*:** ...: ******::****:**:*********:*:.******** **.******
AT3G13350.1 SASFVLRKYYLKFLFQLEHVYYLEKPVSSLQSTDEAL--KSLANESPNPEEGI-------
pt024254_POPTR_ SASFVLRKHYLSLLYHFEQVYHFNKQIPLVSGTD-AMNGRSLVNGSATLEEGAITNQFSS
********:**.:*:::*:**:::* :. :..** *: :**.* *.. ***
AT3G13350.1 -DEPQVGYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQT--PSQSQQTMETPSAIV
pt024254_POPTR_ SQQLQIGCSVSGIIDGKFDNGYLVTVNLGTNQLKGVLYHIPHTFHESQDSRSSDLPP---
:: *:* .*.*:******.*****::**:::*********:* **..:: : *.
AT3G13350.1 QSSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMWSN
pt024254_POPTR_ ----RRRRKRSRLALRDPSQPKSNRSGYNFFFTEHYAQLKPLHHGQEKVISKKIGLLWNN
**:**:*:**: *..:**.:********:*:**:*** :****: *:**** :*.*
AT3G13350.1 LTESEKQVYQDKGVKDVERYRIEMLEYKSSHESGATASTVAQ
pt024254_POPTR_ LTEAEKQVYQEKGLRDKEKYRNEMLEYRSSY---------AQ
***:******:**::* *:** *****:**: **
BoxShade v3.31 C (beta, 970507) Output
AT3G13350.1 |
- |
- |
- |
- |
- |
- |
M |
S |
T |
D |
I |
S |
P |
P |
Y |
S |
Q |
T |
H |
V |
E |
P |
V |
N |
G |
- |
- |
- |
- |
- |
Y |
P |
S |
D |
N |
K |
R |
C |
D |
D |
S |
S |
V |
P |
A |
K |
Y |
D |
D |
L |
V |
R |
N |
S |
A |
L |
F |
W |
E |
K |
pt024254_POPTR_ |
M |
S |
T |
L |
D |
P |
T |
A |
T |
V |
I |
S |
P |
Q |
Q |
Q |
E |
L |
H |
S |
E |
S |
I |
N |
G |
Q |
S |
F |
R |
S |
Y |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
A |
T |
A |
K |
Y |
E |
D |
I |
A |
Q |
S |
S |
D |
L |
F |
W |
E |
K |
|
AT3G13350.1 |
L |
R |
A |
F |
L |
G |
L |
T |
S |
K |
T |
L |
K |
V |
P |
T |
V |
G |
G |
N |
T |
L |
D |
L |
H |
R |
L |
F |
I |
E |
V |
T |
S |
R |
G |
G |
I |
E |
R |
V |
V |
K |
D |
R |
K |
W |
K |
E |
V |
I |
G |
A |
F |
S |
F |
P |
T |
T |
I |
T |
pt024254_POPTR_ |
L |
K |
A |
F |
H |
Q |
S |
F |
G |
T |
K |
F |
M |
V |
P |
T |
V |
G |
G |
K |
A |
L |
D |
L |
H |
H |
L |
F |
V |
E |
V |
T |
S |
R |
G |
G |
I |
E |
K |
V |
I |
T |
D |
R |
K |
W |
K |
E |
V |
I |
T |
A |
F |
N |
F |
P |
T |
T |
I |
T |
|
AT3G13350.1 |
S |
A |
S |
F |
V |
L |
R |
K |
Y |
Y |
L |
K |
F |
L |
F |
Q |
L |
E |
H |
V |
Y |
Y |
L |
E |
K |
P |
V |
S |
S |
L |
Q |
S |
T |
D |
E |
A |
L |
- |
- |
K |
S |
L |
A |
N |
E |
S |
P |
N |
P |
E |
E |
G |
I |
- |
- |
- |
- |
- |
- |
- |
pt024254_POPTR_ |
S |
A |
S |
F |
V |
L |
R |
K |
H |
Y |
L |
S |
L |
L |
Y |
H |
F |
E |
Q |
V |
Y |
H |
F |
N |
K |
Q |
I |
P |
L |
V |
S |
G |
T |
D |
- |
A |
M |
N |
G |
R |
S |
L |
V |
N |
G |
S |
A |
T |
L |
E |
E |
G |
A |
I |
T |
N |
Q |
F |
S |
S |
|
AT3G13350.1 |
- |
D |
E |
P |
Q |
V |
G |
Y |
E |
V |
Q |
G |
F |
I |
D |
G |
K |
F |
D |
S |
G |
Y |
L |
V |
T |
M |
K |
L |
G |
S |
Q |
E |
L |
K |
G |
V |
L |
Y |
H |
I |
P |
Q |
T |
- |
- |
P |
S |
Q |
S |
Q |
Q |
T |
M |
E |
T |
P |
S |
A |
I |
V |
pt024254_POPTR_ |
S |
Q |
Q |
L |
Q |
I |
G |
C |
S |
V |
S |
G |
I |
I |
D |
G |
K |
F |
D |
N |
G |
Y |
L |
V |
T |
V |
N |
L |
G |
T |
N |
Q |
L |
K |
G |
V |
L |
Y |
H |
I |
P |
H |
T |
F |
H |
E |
S |
Q |
D |
S |
R |
S |
S |
D |
L |
P |
P |
- |
- |
- |
|
AT3G13350.1 |
Q |
S |
S |
Q |
R |
R |
H |
R |
K |
K |
S |
K |
L |
A |
V |
V |
D |
T |
Q |
K |
P |
K |
C |
H |
R |
S |
G |
Y |
N |
F |
F |
F |
A |
E |
Q |
Y |
A |
R |
L |
K |
P |
E |
Y |
H |
G |
Q |
E |
R |
S |
I |
T |
K |
K |
I |
G |
H |
M |
W |
S |
N |
pt024254_POPTR_ |
- |
- |
- |
- |
R |
R |
R |
R |
K |
R |
S |
R |
L |
A |
L |
R |
D |
P |
S |
Q |
P |
K |
S |
N |
R |
S |
G |
Y |
N |
F |
F |
F |
T |
E |
H |
Y |
A |
Q |
L |
K |
P |
L |
H |
H |
G |
Q |
E |
K |
V |
I |
S |
K |
K |
I |
G |
L |
L |
W |
N |
N |
|
AT3G13350.1 |
L |
T |
E |
S |
E |
K |
Q |
V |
Y |
Q |
D |
K |
G |
V |
K |
D |
V |
E |
R |
Y |
R |
I |
E |
M |
L |
E |
Y |
K |
S |
S |
H |
E |
S |
G |
A |
T |
A |
S |
T |
V |
A |
Q |
pt024254_POPTR_ |
L |
T |
E |
A |
E |
K |
Q |
V |
Y |
Q |
E |
K |
G |
L |
R |
D |
K |
E |
K |
Y |
R |
N |
E |
M |
L |
E |
Y |
R |
S |
S |
Y |
- |
- |
- |
- |
- |
- |
- |
- |
- |
A |
Q |
|
|