fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G13350.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009597 not found in 313aa AT3G13350.1 1st_1st 0.437013996 Ia
Gm016849 not found in 339aa AT3G13350.1 not_1st 0.423017107 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G13350.1     MSTDISP-PYSQTH-------VEPVNGYPSDNKRCDDSSV----PAKYDDLVRNSALFWE
gm009597_Glyma0 MNVTNKPNPDGSTNGFQSQLQVQQQNGWEQGSSRLRPTKPYPAPTARYQDIVRDANLFWG
gm016849_Glyma0 MNVTNKPNPYGSTNGFQSLL---QQNGWEQGSSRLRPTKLYPAPTARYQDIVRDANLFWG
                *..  .* * ..*:           **: ....*   :.     .*:*:*:**:: *** 

AT3G13350.1     KLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKWKEVIGAFSFPTTI
gm009597_Glyma0 TLQAFHKILGTKYKVATVGGTSLDLHRLFVEVTSRGGIEKVIVDRKWKEVILTFNFKDTI
gm016849_Glyma0 TLQAFHKTLGTKYKISTVGGTPLDLHRLFVEVTSRGGIEKVIVDRKWKEVILTFNFKDTI
                .*:**    ... *:.****..*******:*********:*: ******** :*.*  **

AT3G13350.1     TSASFVLRKYYLKFLFQLEHVYYLEK----PVSS-----------LQSTDEALKSLANES
gm009597_Glyma0 TSASFVVRKSYLSMLYHYEQVYYFGRQGIPPPTP--------------------------
gm016849_Glyma0 TNASFMVRKSYLSMLYHFEQVYYFGRQGIPPTTPDLMIRGQSCQPYSSTTIPEVAAVNDS
                *.***::** **.:*:: *:***: :    * :.                          

AT3G13350.1     P---NPEEGIDEPQVGYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQTPSQSQQTM
gm009597_Glyma0 ---GTPVQAHDD-----MVSGTIDAKFDGGYVVTVILGSEQLKGVLFHVPDNVSQSSHAE
gm016849_Glyma0 PVQSTPVQAHDD-----MVSGTIDAKFDVGYVVTVTLGSEQLQGVLFHVPDNVSQSSHAE
                    .* :. *:      *.* **.*** **:**: ***::*:***:*:*:. ***.:: 

AT3G13350.1     ETPSAIVQ-----SSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQER
gm009597_Glyma0 GTSSS--QNLGDGTSNSQSRKRAKYAPRDPFRPKSNRSGYNFFFAENYARLKPSYHGQER
gm016849_Glyma0 GTSSS--QNLGDDTSNLQSRKRAKYAPRDPFRPKSNRSGYNFFFAENYARLKPSYHGQER
                 *.*:  *     :*: : **::* *  *. :**.:**********:******.******

AT3G13350.1     SITKKIGHMWSNLTESEKQVYQDKGVKDVERYRIEMLEYKSSHESGATASTVAQ
gm009597_Glyma0 AISKRIGFLWNNLSEAERQVYQEKGMRDKERYRTELMEYKSNN-----STPNAQ
gm016849_Glyma0 AISKRIGFLWNNLSEAERQVYQEKGIRDKERYRTELMEYKSNN-----STPNAQ
                :*:*:**.:*.**:*:*:****:**::* **** *::****.:     ::. **
BoxShade v3.31 C (beta, 970507) Output
AT3G13350.1     M S T D I S P - P Y S Q T H - - - - - - - V E P V N G Y P S D N K R C D D S S V - - - - P A K Y D D L V R N S A L F W E
gm009597_Glyma0    M N V T N K P N P D G S T N G F Q S Q L Q V Q Q Q N G W E Q G S S R L R P T K P Y P A P T A R Y Q D I V R D A N L F W G
gm016849_Glyma0    M N V T N K P N P Y G S T N G F Q S L L - - - Q Q N G W E Q G S S R L R P T K L Y P A P T A R Y Q D I V R D A N L F W G
 
AT3G13350.1     K L R A F L G L T S K T L K V P T V G G N T L D L H R L F I E V T S R G G I E R V V K D R K W K E V I G A F S F P T T I
gm009597_Glyma0    T L Q A F H K I L G T K Y K V A T V G G T S L D L H R L F V E V T S R G G I E K V I V D R K W K E V I L T F N F K D T I
gm016849_Glyma0    T L Q A F H K T L G T K Y K I S T V G G T P L D L H R L F V E V T S R G G I E K V I V D R K W K E V I L T F N F K D T I
 
AT3G13350.1     T S A S F V L R K Y Y L K F L F Q L E H V Y Y L E K - - - - P V S S - - - - - - - - - - - L Q S T D E A L K S L A N E S
gm009597_Glyma0    T S A S F V V R K S Y L S M L Y H Y E Q V Y Y F G R Q G I P P P T P - - - - - - - - - - - - - - - - - - - - - - - - - -
gm016849_Glyma0    T N A S F M V R K S Y L S M L Y H F E Q V Y Y F G R Q G I P P T T P D L M I R G Q S C Q P Y S S T T I P E V A A V N D S
 
AT3G13350.1     P - - - N P E E G I D E P Q V G Y E V Q G F I D G K F D S G Y L V T M K L G S Q E L K G V L Y H I P Q T P S Q S Q Q T M
gm009597_Glyma0    - - - G T P V Q A H D D - - - - - M V S G T I D A K F D G G Y V V T V I L G S E Q L K G V L F H V P D N V S Q S S H A E
gm016849_Glyma0    P V Q S T P V Q A H D D - - - - - M V S G T I D A K F D V G Y V V T V T L G S E Q L Q G V L F H V P D N V S Q S S H A E
 
AT3G13350.1     E T P S A I V Q - - - - - S S Q R R H R K K S K L A V V D T Q K P K C H R S G Y N F F F A E Q Y A R L K P E Y H G Q E R
gm009597_Glyma0    G T S S S - - Q N L G D G T S N S Q S R K R A K Y A P R D P F R P K S N R S G Y N F F F A E N Y A R L K P S Y H G Q E R
gm016849_Glyma0    G T S S S - - Q N L G D D T S N L Q S R K R A K Y A P R D P F R P K S N R S G Y N F F F A E N Y A R L K P S Y H G Q E R
 
AT3G13350.1     S I T K K I G H M W S N L T E S E K Q V Y Q D K G V K D V E R Y R I E M L E Y K S S H E S G A T A S T V A Q
gm009597_Glyma0    A I S K R I G F L W N N L S E A E R Q V Y Q E K G M R D K E R Y R T E L M E Y K S N N - - - - - S T P N A Q
gm016849_Glyma0    A I S K R I G F L W N N L S E A E R Q V Y Q E K G I R D K E R Y R T E L M E Y K S N N - - - - - S T P N A Q
 
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