fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G13540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os003399 not found in 275aa AT3G13540.1 1st_1st 0.439759036 Ia
Sb008582 not found in 226aa AT3G13540.1 1st_1st 0.417670682 Ia
Gm053348 not found in 281aa AT3G13540.1 1st_1st 0.429718875 Ia
Pt027958 not found in 316aa AT3G13540.1 1st_1st 0.506024096 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G13540.1     MMSCGGKKPVS-------KKTTPCCTKMGMKRGPWTVEEDEILV---------SFIKKEG
Sb008582_Sorbi1 ------EEKGSTDDAEAGGA--------AAGRGRRGGDEDDAEAGGVDAGGGRAAVAGRG
pt027958_POPTR_ -----MRKPTSATTAESAAKTTPCCIKVGLKRGPWTPEEDELLV---------NYIKKEG
gm053348_Glyma1 -M---GRAP--------------CCSKVGLHRGPWTPREDALLT---------KYIQTHG
Os003399_Os01t0 -MK--RKRPAALRGGEEAAAA-------ALKRGPWTPEEDEVLA---------RFVAREG
                      .                     .  **     **   .           :  .*

AT3G13540.1     EGRWRSL-----PKRAGLLRCGKSCRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNR
Sb008582_Sorbi1 EGGGRAVAHAAAPRGAAALR----------QELQAPV---------DELPQAGHQARAHR
pt027958_POPTR_ EGRWRTL-----PKKAGLLRCGKSCRLRWMNYLRPSVKRGQIADDEEDLILRLHRLLGNR
gm053348_Glyma1 EGQWRSL-----PKRAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEDDLIVRMHSLLGNR
Os003399_Os01t0 CDRWRTL-----PRRAGLLRCGKSCRLRWMNYLRPDIKRCPIADDEEDLILRLHRLLGNR
                 .  *::     *: *. **          : *:. :         ::*    *   .:*

AT3G13540.1     WSLIA--------GRIPGRTDNEIKNYWNTHLRKKLLRQGIDPQTH--------------
Sb008582_Sorbi1 RRRGGPHPPPPPPARQPVVADRRAAAWANGQRDQELLELAPQQEAH---------RAGH-
pt027958_POPTR_ WSLIA--------GRIPGRTDNEIKNYWNTHLSKKLISQGIDPRTH--------------
gm053348_Glyma1 WSLIA--------GRLPGRTDNEIKNYWNTHLSKKLRNQGTDPKTHDKLTEAPEKKKGKK
Os003399_Os01t0 WSLIA--------GRLPGRTDNEIKNYWNSHLSKKLIAQGIDPRTH--------------
                    .        .* *  :*..   : * :  ::*   . : .:*              

AT3G13540.1     --------------------KPLDANNIHK-----------PEEEVSGGQ--------KY
Sb008582_Sorbi1 --------------------RP-------------------AGAHASARSSRKPPLPLPV
pt027958_POPTR_ --------------------KPLNPQSFDQ-----------SKPSLSKANLHQAR--LKE
gm053348_Glyma1 KNKQKNENNKGSEKTLVYLPKPIRVKALSSCIPRTDSTLTLNSNSATASTSEEK---VQS
Os003399_Os01t0 --------------------KPLTAAADHS-----------NAAAAVAATSYKKAVPAKP
                                    :*                                      

AT3G13540.1     PLEPISSSH-----TDDTT------VNGGDGDSKNSINV-------------FGGE---H
Sb008582_Sorbi1 PRRRRSSSS-----------------------------------------GRFCRQD--A
pt027958_POPTR_ PIKNIVSSG-----LEEATSGSTRIINRENEYFQNNINAHLDDQYH---ADHFIAS---H
gm053348_Glyma1 PEAEVKEVNMVWGVGDDADNGGIEIFFGEDHDLVNNTAS-----YEECYSDVHTDD---H
Os003399_Os01t0 PRTASSPAA-----GIECSDDRARPADGG-GDFAAMVSAADAEGFEGGFGDQFCAEDAVH
                *                                                   .  .    

AT3G13540.1     GY--------------------------EDFGFCYDDKFSSFLNSLIND--------VGD
Sb008582_Sorbi1 GTA--------------GSRATVCAAA------------------------------ATA
pt027958_POPTR_ GYTSLLNYDGTSGMDLKGDQSLGIGEADQDINSGTDDVF-SFLNSLINEEALQQHQILNV
gm053348_Glyma1 GTL--------------------------------EKLYEEYLQLLNVEEKPDEL-----
Os003399_Os01t0 G-----------GFDM-GSASAMVG----------DDDFSSFLDSLINDEQLG-------
                *                                                           

AT3G13540.1     PFGNIIPISQPLQMDDCKDGIV-----------GASSSSLGHD-----------------
Sb008582_Sorbi1 TATACAP-----------DLAVRRRCWRRLRHQHDGSRRRGLR--WIR------------
pt027958_POPTR_ PNVNCAPPSS--------DPFV-----------SIAATTFGLGTGWESTLMSSAFNQNES
gm053348_Glyma1 ------------------DSFA------------------------QSLLV---------
Os003399_Os01t0 ------------------DLFVVEG-----NDHEHGNGEIGHG------------DVMES
                                  *  .                                      

AT3G13540.1     --
Sb008582_Sorbi1 --
pt027958_POPTR_ K-
gm053348_Glyma1 --
Os003399_Os01t0 KQ
BoxShade v3.31 C (beta, 970507) Output
AT3G13540.1     M M S C G G K K P V S - - - - - - - K K T T P C C T K M G M K R G P W T V E E D E I L V - - - - - - - - - S F I K K E G
Sb008582_Sorbi1    - - - - - - E E K G S T D D A E A G G A - - - - - - - - A A G R G R R G G D E D D A E A G G V D A G G G R A A V A G R G
pt027958_POPTR_    - - - - - M R K P T S A T T A E S A A K T T P C C I K V G L K R G P W T P E E D E L L V - - - - - - - - - N Y I K K E G
gm053348_Glyma1    - M - - - G R A P - - - - - - - - - - - - - - C C S K V G L H R G P W T P R E D A L L T - - - - - - - - - K Y I Q T H G
Os003399_Os01t0    - M K - - R K R P A A L R G G E E A A A A - - - - - - - A L K R G P W T P E E D E V L A - - - - - - - - - R F V A R E G
 
AT3G13540.1     E G R W R S L - - - - - P K R A G L L R C G K S C R L R W M N Y L R P S V K R G G I T S D E E D L I L R L H R L L G N R
Sb008582_Sorbi1    E G G G R A V A H A A A P R G A A A L R - - - - - - - - - - Q E L Q A P V - - - - - - - - - D E L P Q A G H Q A R A H R
pt027958_POPTR_    E G R W R T L - - - - - P K K A G L L R C G K S C R L R W M N Y L R P S V K R G Q I A D D E E D L I L R L H R L L G N R
gm053348_Glyma1    E G Q W R S L - - - - - P K R A G L L R C G K S C R L R W M N Y L R P D I K R G N I T P E E D D L I V R M H S L L G N R
Os003399_Os01t0    C D R W R T L - - - - - P R R A G L L R C G K S C R L R W M N Y L R P D I K R C P I A D D E E D L I L R L H R L L G N R
 
AT3G13540.1     W S L I A - - - - - - - - G R I P G R T D N E I K N Y W N T H L R K K L L R Q G I D P Q T H - - - - - - - - - - - - - -
Sb008582_Sorbi1    R R R G G P H P P P P P P A R Q P V V A D R R A A A W A N G Q R D Q E L L E L A P Q Q E A H - - - - - - - - - R A G H -
pt027958_POPTR_    W S L I A - - - - - - - - G R I P G R T D N E I K N Y W N T H L S K K L I S Q G I D P R T H - - - - - - - - - - - - - -
gm053348_Glyma1    W S L I A - - - - - - - - G R L P G R T D N E I K N Y W N T H L S K K L R N Q G T D P K T H D K L T E A P E K K K G K K
Os003399_Os01t0    W S L I A - - - - - - - - G R L P G R T D N E I K N Y W N S H L S K K L I A Q G I D P R T H - - - - - - - - - - - - - -
 
AT3G13540.1     - - - - - - - - - - - - - - - - - - - - K P L D A N N I H K - - - - - - - - - - - P E E E V S G G Q - - - - - - - - K Y
Sb008582_Sorbi1    - - - - - - - - - - - - - - - - - - - - R P - - - - - - - - - - - - - - - - - - - A G A H A S A R S S R K P P L P L P V
pt027958_POPTR_    - - - - - - - - - - - - - - - - - - - - K P L N P Q S F D Q - - - - - - - - - - - S K P S L S K A N L H Q A R - - L K E
gm053348_Glyma1    K N K Q K N E N N K G S E K T L V Y L P K P I R V K A L S S C I P R T D S T L T L N S N S A T A S T S E E K - - - V Q S
Os003399_Os01t0    - - - - - - - - - - - - - - - - - - - - K P L T A A A D H S - - - - - - - - - - - N A A A A V A A T S Y K K A V P A K P
 
AT3G13540.1     P L E P I S S S H - - - - - T D D T T - - - - - - V N G G D G D S K N S I N V - - - - - - - - - - - - - F G G E - - - H
Sb008582_Sorbi1    P R R R R S S S S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G R F C R Q D - - A
pt027958_POPTR_    P I K N I V S S G - - - - - L E E A T S G S T R I I N R E N E Y F Q N N I N A H L D D Q Y H - - - A D H F I A S - - - H
gm053348_Glyma1    P E A E V K E V N M V W G V G D D A D N G G I E I F F G E D H D L V N N T A S - - - - - Y E E C Y S D V H T D D - - - H
Os003399_Os01t0    P R T A S S P A A - - - - - G I E C S D D R A R P A D G G - G D F A A M V S A A D A E G F E G G F G D Q F C A E D A V H
 
AT3G13540.1     G Y - - - - - - - - - - - - - - - - - - - - - - - - - - E D F G F C Y D D K F S S F L N S L I N D - - - - - - - - V G D
Sb008582_Sorbi1    G T A - - - - - - - - - - - - - - G S R A T V C A A A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A T A
pt027958_POPTR_    G Y T S L L N Y D G T S G M D L K G D Q S L G I G E A D Q D I N S G T D D V F - S F L N S L I N E E A L Q Q H Q I L N V
gm053348_Glyma1    G T L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E K L Y E E Y L Q L L N V E E K P D E L - - - - -
Os003399_Os01t0    G - - - - - - - - - - - G F D M - G S A S A M V G - - - - - - - - - - D D D F S S F L D S L I N D E Q L G - - - - - - -
 
AT3G13540.1     P F G N I I P I S Q P L Q M D D C K D G I V - - - - - - - - - - - G A S S S S L G H D - - - - - - - - - - - - - - - - -
Sb008582_Sorbi1    T A T A C A P - - - - - - - - - - - D L A V R R R C W R R L R H Q H D G S R R R G L R - - W I R - - - - - - - - - - - -
pt027958_POPTR_    P N V N C A P P S S - - - - - - - - D P F V - - - - - - - - - - - S I A A T T F G L G T G W E S T L M S S A F N Q N E S
gm053348_Glyma1    - - - - - - - - - - - - - - - - - - D S F A - - - - - - - - - - - - - - - - - - - - - - - - Q S L L V - - - - - - - - -
Os003399_Os01t0    - - - - - - - - - - - - - - - - - - D L F V V E G - - - - - N D H E H G N G E I G H G - - - - - - - - - - - - D V M E S
 
AT3G13540.1     - -
Sb008582_Sorbi1    - -
pt027958_POPTR_    K -
gm053348_Glyma1    - -
Os003399_Os01t0    K Q
 
0