fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G13540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp002778 not found in 471aa AT5G15310.1 1st_not 0.405622489 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G13540.1     MMSCGGKKPVSKKTTPCCTKMGMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRC
pp002778_Pp1s31 -----------MGRTPCCDKMGLKKGPWTPDEDQKLVTYIQRNGHGSWRALPKHAGLLRC
                              **** ***:*:**** :**: **::*:::*.* **:***:******

AT3G13540.1     GKSCRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWN
pp002778_Pp1s31 GKSCRLRWTNYLRPDIKRGRFSFEEEQVIIHLHGILGNRWSAIAAHLPGRTDNEIKNYWN
                ******** *****.:*** :: :**::*::** :****** **.::*************

AT3G13540.1     THLRKKLLRQGIDPQTH-------------KPLDANNIHKPEE-----------------
pp002778_Pp1s31 THLRKRLLQMGIDPVTHKVRSNLLIENLDLKPMVSSTLSHMSQWDRVRMEMEARLSSDYF
                *****:**: **** **             **: :..: : .:                 

AT3G13540.1     -----------EVSGGQ----KYP-----------------------LEPISSSHTDDTT
pp002778_Pp1s31 AKSSAHGAAIFEASGTSASFIKAPSDCSMRSWKTQVSESLLRRDFGVLEKLPPCSMDLQT
                           *.** .    * *                       ** :...  *  *

AT3G13540.1     V-------------NGGDGDSKNSINVFGGEH-GYE--------------DFGFCYD---
pp002778_Pp1s31 VLQDWEDSLHCQPMEPGLYDSQMRAKTHSGSHSGYSQTPRNDNCSGTTVTDLAARFETFP
                *             : *  **:   :...*.* **.              *:.  ::   

AT3G13540.1     -------------------DKFSSFLNSLIND--------------------VGDPFGN-
pp002778_Pp1s31 SFHQTSPSPSPLPQTSQISDSFTSSGTKLFPDLPKPNSLPSMIPEHFSPTSTLSSPFGTS
                                   *.*:*  ..*: *                    :..***. 

AT3G13540.1     ----IIP-----------ISQPLQMD----------------------------------
pp002778_Pp1s31 PSDFMVPPPSSNCEIAFSTSPPLQLPSPTFWTSLSAPTTMGAGDLQLPSEIPELLMELHA
                    ::*            * ***:                                   

AT3G13540.1     -----------------------------DCKD------GIVGASSSSLGHD--------
pp002778_Pp1s31 EPAVPDLIVATVPTTTAGTPGWTSQQGLIESKDYWANMLHLVGPPASQQLSTLLSTPARL
                                             :.**       :**..:*.            

AT3G13540.1     --
pp002778_Pp1s31 TR
BoxShade v3.31 C (beta, 970507) Output
AT3G13540.1     M M S C G G K K P V S K K T T P C C T K M G M K R G P W T V E E D E I L V S F I K K E G E G R W R S L P K R A G L L R C
pp002778_Pp1s31    - - - - - - - - - - - M G R T P C C D K M G L K K G P W T P D E D Q K L V T Y I Q R N G H G S W R A L P K H A G L L R C
 
AT3G13540.1     G K S C R L R W M N Y L R P S V K R G G I T S D E E D L I L R L H R L L G N R W S L I A G R I P G R T D N E I K N Y W N
pp002778_Pp1s31    G K S C R L R W T N Y L R P D I K R G R F S F E E E Q V I I H L H G I L G N R W S A I A A H L P G R T D N E I K N Y W N
 
AT3G13540.1     T H L R K K L L R Q G I D P Q T H - - - - - - - - - - - - - K P L D A N N I H K P E E - - - - - - - - - - - - - - - - -
pp002778_Pp1s31    T H L R K R L L Q M G I D P V T H K V R S N L L I E N L D L K P M V S S T L S H M S Q W D R V R M E M E A R L S S D Y F
 
AT3G13540.1     - - - - - - - - - - - E V S G G Q - - - - K Y P - - - - - - - - - - - - - - - - - - - - - - - L E P I S S S H T D D T T
pp002778_Pp1s31    A K S S A H G A A I F E A S G T S A S F I K A P S D C S M R S W K T Q V S E S L L R R D F G V L E K L P P C S M D L Q T
 
AT3G13540.1     V - - - - - - - - - - - - - N G G D G D S K N S I N V F G G E H - G Y E - - - - - - - - - - - - - - D F G F C Y D - - -
pp002778_Pp1s31    V L Q D W E D S L H C Q P M E P G L Y D S Q M R A K T H S G S H S G Y S Q T P R N D N C S G T T V T D L A A R F E T F P
 
AT3G13540.1     - - - - - - - - - - - - - - - - - - - D K F S S F L N S L I N D - - - - - - - - - - - - - - - - - - - - V G D P F G N -
pp002778_Pp1s31    S F H Q T S P S P S P L P Q T S Q I S D S F T S S G T K L F P D L P K P N S L P S M I P E H F S P T S T L S S P F G T S
 
AT3G13540.1     - - - - I I P - - - - - - - - - - - I S Q P L Q M D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp002778_Pp1s31    P S D F M V P P P S S N C E I A F S T S P P L Q L P S P T F W T S L S A P T T M G A G D L Q L P S E I P E L L M E L H A
 
AT3G13540.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D C K D - - - - - - G I V G A S S S S L G H D - - - - - - - -
pp002778_Pp1s31    E P A V P D L I V A T V P T T T A G T P G W T S Q Q G L I E S K D Y W A N M L H L V G P P A S Q Q L S T L L S T P A R L
 
AT3G13540.1     - -
pp002778_Pp1s31    T R
 
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