fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G13540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os003399 not found in 275aa AT3G13540.1 1st_1st 0.439759036 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G13540.1     MMSCGGKKPVSKKTTPCCTKMGMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRC
Os003399_Os01t0 ---MKRKRPAALRGGEEAAAAALKRGPWTPEEDEVLARFVAREGCDRWRTLPRRAGLLRC
                      *:*.: :    .:  .:****** ****:*. *: :** .***:**:*******

AT3G13540.1     GKSCRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWN
Os003399_Os01t0 GKSCRLRWMNYLRPDIKRCPIADDEEDLILRLHRLLGNRWSLIAGRLPGRTDNEIKNYWN
                **************.:**  *:.***********************:*************

AT3G13540.1     THLRKKLLRQGIDPQTHKPLDANNIHKPEEEVSGGQKY----PLEPISSSH--------T
Os003399_Os01t0 SHLSKKLIAQGIDPRTHKPLTAAADHSNAAAAVAATSYKKAVPAKPPRTASSPAAGIECS
                :** ***: *****:***** *   *.    . .. .*    * :*  ::         :

AT3G13540.1     DDTTV---NGGD-------GDSKNSINVFGGE-------HGYEDFG----FCYDDKFSSF
Os003399_Os01t0 DDRARPADGGGDFAAMVSAADAEGFEGGFGDQFCAEDAVHGGFDMGSASAMVGDDDFSSF
                ** :    .***       .*::.  . **.:       **  *:*    :  **.****

AT3G13540.1     LNSLIND--VGDPFGNIIPISQPLQMDDCKDGIVGASSSSLGHD-------
Os003399_Os01t0 LDSLINDEQLGDLF--------VVEGNDHEHG-----NGEIGHGDVMESKQ
                *:*****  :** *         :: :* :.*     ...:**.
BoxShade v3.31 C (beta, 970507) Output
AT3G13540.1     M M S C G G K K P V S K K T T P C C T K M G M K R G P W T V E E D E I L V S F I K K E G E G R W R S L P K R A G L L R C
Os003399_Os01t0    - - - M K R K R P A A L R G G E E A A A A A L K R G P W T P E E D E V L A R F V A R E G C D R W R T L P R R A G L L R C
 
AT3G13540.1     G K S C R L R W M N Y L R P S V K R G G I T S D E E D L I L R L H R L L G N R W S L I A G R I P G R T D N E I K N Y W N
Os003399_Os01t0    G K S C R L R W M N Y L R P D I K R C P I A D D E E D L I L R L H R L L G N R W S L I A G R L P G R T D N E I K N Y W N
 
AT3G13540.1     T H L R K K L L R Q G I D P Q T H K P L D A N N I H K P E E E V S G G Q K Y - - - - P L E P I S S S H - - - - - - - - T
Os003399_Os01t0    S H L S K K L I A Q G I D P R T H K P L T A A A D H S N A A A A V A A T S Y K K A V P A K P P R T A S S P A A G I E C S
 
AT3G13540.1     D D T T V - - - N G G D - - - - - - - G D S K N S I N V F G G E - - - - - - - H G Y E D F G - - - - F C Y D D K F S S F
Os003399_Os01t0    D D R A R P A D G G G D F A A M V S A A D A E G F E G G F G D Q F C A E D A V H G G F D M G S A S A M V G D D D F S S F
 
AT3G13540.1     L N S L I N D - - V G D P F G N I I P I S Q P L Q M D D C K D G I V G A S S S S L G H D - - - - - - -
Os003399_Os01t0    L D S L I N D E Q L G D L F - - - - - - - - V V E G N D H E H G - - - - - N G E I G H G D V M E S K Q
 
0