fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G13540.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb008582 not found in 226aa AT3G13540.1 1st_1st 0.417670682 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G13540.1     MMSCGGKKPVSKKTTPCCTKMGMK--RGPWTVEEDEILV---------SFIKKEGEGRWR
Sb008582_Sorbi1 ---------EEKGSTDDAEAGGAAAGRGRRGGDEDDAEAGGVDAGGGRAAVAGRGEGGGR
                          .* :*  .   *    **    :**:  .         : :  .***  *

AT3G13540.1     SL-----PKRAGLLR------------CGKSCRLRWMNYLRPSVKRGGITSDEEDLILRL
Sb008582_Sorbi1 AVAHAAAPRGAAALRQELQAPVDELPQAGHQARAH-------RRRRGGPHPPPPP-----
                ::     *: *. **            .*:..* :         :***  .         

AT3G13540.1     HRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKLLRQGIDPQT------HKPLDANNIH
Sb008582_Sorbi1 -----------PARQPVVADRRAAAWANGQRDQELLE--LAPQQEAHRAGHRPAGAH---
                           ..* *  :*..   : * :  ::**.  : **       *:* .*:   

AT3G13540.1     KPEEEVSGGQKYPLEPISSSHTDDTTVNGGDGDSKNSINVFGGEHGYEDFGFCYDDKFSS
Sb008582_Sorbi1 ---ASARSSRKPPL-PLPVPRRRRSSSSG---------------------RFCRQDAGTA
                    .. ..:* ** *:. .:   :: .*                      ** :*  ::

AT3G13540.1     FLNSLINDVGDPFGNIIPISQPLQMDDCKDGIVGASSSSLG-------------------
Sb008582_Sorbi1 --------------------------GSRATVCAAAATATATACAPDLAVRRRCWRRLRH
                                          ..:  : .*:::: .                   

AT3G13540.1     -HD-----------
Sb008582_Sorbi1 QHDGSRRRGLRWIR
                 **
BoxShade v3.31 C (beta, 970507) Output
AT3G13540.1     M M S C G G K K P V S K K T T P C C T K M G M K - - R G P W T V E E D E I L V - - - - - - - - - S F I K K E G E G R W R
Sb008582_Sorbi1    - - - - - - - - - E E K G S T D D A E A G G A A A G R G R R G G D E D D A E A G G V D A G G G R A A V A G R G E G G G R
 
AT3G13540.1     S L - - - - - P K R A G L L R - - - - - - - - - - - - C G K S C R L R W M N Y L R P S V K R G G I T S D E E D L I L R L
Sb008582_Sorbi1    A V A H A A A P R G A A A L R Q E L Q A P V D E L P Q A G H Q A R A H - - - - - - - R R R R G G P H P P P P P - - - - -
 
AT3G13540.1     H R L L G N R W S L I A G R I P G R T D N E I K N Y W N T H L R K K L L R Q G I D P Q T - - - - - - H K P L D A N N I H
Sb008582_Sorbi1    - - - - - - - - - - - P A R Q P V V A D R R A A A W A N G Q R D Q E L L E - - L A P Q Q E A H R A G H R P A G A H - - -
 
AT3G13540.1     K P E E E V S G G Q K Y P L E P I S S S H T D D T T V N G G D G D S K N S I N V F G G E H G Y E D F G F C Y D D K F S S
Sb008582_Sorbi1    - - - A S A R S S R K P P L - P L P V P R R R R S S S S G - - - - - - - - - - - - - - - - - - - - - R F C R Q D A G T A
 
AT3G13540.1     F L N S L I N D V G D P F G N I I P I S Q P L Q M D D C K D G I V G A S S S S L G - - - - - - - - - - - - - - - - - - -
Sb008582_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - G S R A T V C A A A A T A T A T A C A P D L A V R R R C W R R L R H
 
AT3G13540.1     - H D - - - - - - - - - - -
Sb008582_Sorbi1    Q H D G S R R R G L R W I R
 
0