Input
| Putative repression domain
|
|
AT3G13850.1 |
FLNAHKLFGVSNITK at 69/268 in AT3G13850.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt031211 |
FLNAHKLFGVSNISK in 48/278 |
AT3G13850.1 |
1st_1st |
0.340823970 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G13850.1 MPSGKPSSVFPLHPKPTPLKPSSSTSSSNNNSTNQACAACKYQRRKCAPDCLLAPYFPHD
pt031211_POPTR_ ----------------------MTNISRTGNSTTQACAACKYQRRKCAPDCILAPYFPHN
:. * ..***.*****************:*******:
AT3G13850.1 RHRQFLNAHKLFGVSNITKIIKSLTPPEKDAAMHTIMFQSDARANDPVDGCYGIIKKLQY
pt031211_POPTR_ RQRQFLNAHKLFGVSNISKIIKNLNPPEKDEAMRTIIFQSDVRANDPVGGCYRMIRELQR
*:***************:****.*.***** **:**:****.******.*** :*::**
AT3G13850.1 QIEYTRNELEIVLQQLAMFRDRAHQHHHQEPHIQM----------QEQEDLSS-------
pt031211_POPTR_ QIEYTRAELDIALHQVALYRAQA-AAQQQTQLIQTAAAAAAGPDHQTDHDDSTRLDCENI
****** **:*.*:*:*::* :* ::* ** * :.* *:
AT3G13850.1 -FSSSCDLNNNNSIPYN--YPLNHIQEPNQQQYCSSGNNFSGLQED-----MW-------
pt031211_POPTR_ IITDTFDMYDTVVMQYHDQYPQSH---QDQQEFVIY--NQAHLQEDHANPNAWAAVPVQD
::.: *: :. : *: ** .* :**:: * : **** *
AT3G13850.1 ---CLQLQDSSTIVNM-KAGF--IDEC---EDVKPVEEVSSERHEFEP-HEAFVEQRKLD
pt031211_POPTR_ INPCLSISSATYLDDFNQANYNGNDQCIMHGDMKPLLDVRNV--NFEPDRDSLVDTRF--
**.:..:: : :: :*.: *:* *:**: :* . :*** ::::*: *
AT3G13850.1 LPSAQYIISS
pt031211_POPTR_ VPSTQLLISS
:**:* :***
BoxShade v3.31 C (beta, 970507) Output
AT3G13850.1 |
M |
P |
S |
G |
K |
P |
S |
S |
V |
F |
P |
L |
H |
P |
K |
P |
T |
P |
L |
K |
P |
S |
S |
S |
T |
S |
S |
S |
N |
N |
N |
S |
T |
N |
Q |
A |
C |
A |
A |
C |
K |
Y |
Q |
R |
R |
K |
C |
A |
P |
D |
C |
L |
L |
A |
P |
Y |
F |
P |
H |
D |
pt031211_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
T |
N |
I |
S |
R |
T |
G |
N |
S |
T |
T |
Q |
A |
C |
A |
A |
C |
K |
Y |
Q |
R |
R |
K |
C |
A |
P |
D |
C |
I |
L |
A |
P |
Y |
F |
P |
H |
N |
|
AT3G13850.1 |
R |
H |
R |
Q |
F |
L |
N |
A |
H |
K |
L |
F |
G |
V |
S |
N |
I |
T |
K |
I |
I |
K |
S |
L |
T |
P |
P |
E |
K |
D |
A |
A |
M |
H |
T |
I |
M |
F |
Q |
S |
D |
A |
R |
A |
N |
D |
P |
V |
D |
G |
C |
Y |
G |
I |
I |
K |
K |
L |
Q |
Y |
pt031211_POPTR_ |
R |
Q |
R |
Q |
F |
L |
N |
A |
H |
K |
L |
F |
G |
V |
S |
N |
I |
S |
K |
I |
I |
K |
N |
L |
N |
P |
P |
E |
K |
D |
E |
A |
M |
R |
T |
I |
I |
F |
Q |
S |
D |
V |
R |
A |
N |
D |
P |
V |
G |
G |
C |
Y |
R |
M |
I |
R |
E |
L |
Q |
R |
|
AT3G13850.1 |
Q |
I |
E |
Y |
T |
R |
N |
E |
L |
E |
I |
V |
L |
Q |
Q |
L |
A |
M |
F |
R |
D |
R |
A |
H |
Q |
H |
H |
H |
Q |
E |
P |
H |
I |
Q |
M |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
Q |
E |
Q |
E |
D |
L |
S |
S |
- |
- |
- |
- |
- |
- |
- |
pt031211_POPTR_ |
Q |
I |
E |
Y |
T |
R |
A |
E |
L |
D |
I |
A |
L |
H |
Q |
V |
A |
L |
Y |
R |
A |
Q |
A |
- |
A |
A |
Q |
Q |
Q |
T |
Q |
L |
I |
Q |
T |
A |
A |
A |
A |
A |
A |
G |
P |
D |
H |
Q |
T |
D |
H |
D |
D |
S |
T |
R |
L |
D |
C |
E |
N |
I |
|
AT3G13850.1 |
- |
F |
S |
S |
S |
C |
D |
L |
N |
N |
N |
N |
S |
I |
P |
Y |
N |
- |
- |
Y |
P |
L |
N |
H |
I |
Q |
E |
P |
N |
Q |
Q |
Q |
Y |
C |
S |
S |
G |
N |
N |
F |
S |
G |
L |
Q |
E |
D |
- |
- |
- |
- |
- |
M |
W |
- |
- |
- |
- |
- |
- |
- |
pt031211_POPTR_ |
I |
I |
T |
D |
T |
F |
D |
M |
Y |
D |
T |
V |
V |
M |
Q |
Y |
H |
D |
Q |
Y |
P |
Q |
S |
H |
- |
- |
- |
Q |
D |
Q |
Q |
E |
F |
V |
I |
Y |
- |
- |
N |
Q |
A |
H |
L |
Q |
E |
D |
H |
A |
N |
P |
N |
A |
W |
A |
A |
V |
P |
V |
Q |
D |
|
AT3G13850.1 |
- |
- |
- |
C |
L |
Q |
L |
Q |
D |
S |
S |
T |
I |
V |
N |
M |
- |
K |
A |
G |
F |
- |
- |
I |
D |
E |
C |
- |
- |
- |
E |
D |
V |
K |
P |
V |
E |
E |
V |
S |
S |
E |
R |
H |
E |
F |
E |
P |
- |
H |
E |
A |
F |
V |
E |
Q |
R |
K |
L |
D |
pt031211_POPTR_ |
I |
N |
P |
C |
L |
S |
I |
S |
S |
A |
T |
Y |
L |
D |
D |
F |
N |
Q |
A |
N |
Y |
N |
G |
N |
D |
Q |
C |
I |
M |
H |
G |
D |
M |
K |
P |
L |
L |
D |
V |
R |
N |
V |
- |
- |
N |
F |
E |
P |
D |
R |
D |
S |
L |
V |
D |
T |
R |
F |
- |
- |
|
AT3G13850.1 |
L |
P |
S |
A |
Q |
Y |
I |
I |
S |
S |
pt031211_POPTR_ |
V |
P |
S |
T |
Q |
L |
L |
I |
S |
S |
|
|