fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G13850.1 FLNAHKLFGVSNITK at 69/268 in AT3G13850.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt031211 FLNAHKLFGVSNISK in 48/278 AT3G13850.1 1st_1st 0.340823970 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G13850.1     MPSGKPSSVFPLHPKPTPLKPSSSTSSSNNNSTNQACAACKYQRRKCAPDCLLAPYFPHD
pt031211_POPTR_ ----------------------MTNISRTGNSTTQACAACKYQRRKCAPDCILAPYFPHN
                                       :. * ..***.*****************:*******:

AT3G13850.1     RHRQFLNAHKLFGVSNITKIIKSLTPPEKDAAMHTIMFQSDARANDPVDGCYGIIKKLQY
pt031211_POPTR_ RQRQFLNAHKLFGVSNISKIIKNLNPPEKDEAMRTIIFQSDVRANDPVGGCYRMIRELQR
                *:***************:****.*.***** **:**:****.******.*** :*::** 

AT3G13850.1     QIEYTRNELEIVLQQLAMFRDRAHQHHHQEPHIQM----------QEQEDLSS-------
pt031211_POPTR_ QIEYTRAELDIALHQVALYRAQA-AAQQQTQLIQTAAAAAAGPDHQTDHDDSTRLDCENI
                ****** **:*.*:*:*::* :*   ::*   **           * :.* *:       

AT3G13850.1     -FSSSCDLNNNNSIPYN--YPLNHIQEPNQQQYCSSGNNFSGLQED-----MW-------
pt031211_POPTR_ IITDTFDMYDTVVMQYHDQYPQSH---QDQQEFVIY--NQAHLQEDHANPNAWAAVPVQD
                 ::.: *: :.  : *:  ** .*    :**::     * : ****      *       

AT3G13850.1     ---CLQLQDSSTIVNM-KAGF--IDEC---EDVKPVEEVSSERHEFEP-HEAFVEQRKLD
pt031211_POPTR_ INPCLSISSATYLDDFNQANYNGNDQCIMHGDMKPLLDVRNV--NFEPDRDSLVDTRF--
                   **.:..:: : :: :*.:   *:*    *:**: :* .   :*** ::::*: *   

AT3G13850.1     LPSAQYIISS
pt031211_POPTR_ VPSTQLLISS
                :**:* :***
BoxShade v3.31 C (beta, 970507) Output
AT3G13850.1     M P S G K P S S V F P L H P K P T P L K P S S S T S S S N N N S T N Q A C A A C K Y Q R R K C A P D C L L A P Y F P H D
pt031211_POPTR_    - - - - - - - - - - - - - - - - - - - - - - M T N I S R T G N S T T Q A C A A C K Y Q R R K C A P D C I L A P Y F P H N
 
AT3G13850.1     R H R Q F L N A H K L F G V S N I T K I I K S L T P P E K D A A M H T I M F Q S D A R A N D P V D G C Y G I I K K L Q Y
pt031211_POPTR_    R Q R Q F L N A H K L F G V S N I S K I I K N L N P P E K D E A M R T I I F Q S D V R A N D P V G G C Y R M I R E L Q R
 
AT3G13850.1     Q I E Y T R N E L E I V L Q Q L A M F R D R A H Q H H H Q E P H I Q M - - - - - - - - - - Q E Q E D L S S - - - - - - -
pt031211_POPTR_    Q I E Y T R A E L D I A L H Q V A L Y R A Q A - A A Q Q Q T Q L I Q T A A A A A A G P D H Q T D H D D S T R L D C E N I
 
AT3G13850.1     - F S S S C D L N N N N S I P Y N - - Y P L N H I Q E P N Q Q Q Y C S S G N N F S G L Q E D - - - - - M W - - - - - - -
pt031211_POPTR_    I I T D T F D M Y D T V V M Q Y H D Q Y P Q S H - - - Q D Q Q E F V I Y - - N Q A H L Q E D H A N P N A W A A V P V Q D
 
AT3G13850.1     - - - C L Q L Q D S S T I V N M - K A G F - - I D E C - - - E D V K P V E E V S S E R H E F E P - H E A F V E Q R K L D
pt031211_POPTR_    I N P C L S I S S A T Y L D D F N Q A N Y N G N D Q C I M H G D M K P L L D V R N V - - N F E P D R D S L V D T R F - -
 
AT3G13850.1     L P S A Q Y I I S S
pt031211_POPTR_    V P S T Q L L I S S
 
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