fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G13850.1 FLNAHKLFGVSNITK at 69/268 in AT3G13850.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm021857 FLNAHKLFGVSNITK in 59/232 AT3G13850.1 1st_1st 0.338951310 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G13850.1     MPSGKPSSVFPLHPKPTPLKPSSSTSSSNNNSTNQACAACKYQRRKCAPDCLLAPYFPHD
gm021857_Glyma0 MNNNNPNN-----------NSNRISSPRNGNSTTQACAACKYQRRKCAPDCILAPYFPHE
                * ..:*..           :..  :*. *.***.*****************:*******:

AT3G13850.1     RHRQFLNAHKLFGVSNITKIIKSLTPPEKDAAMHTIMFQSDARANDPVDGCYGIIKKLQY
gm021857_Glyma0 RQRQFLNAHKLFGVSNITKIIKLLSPQDKDQAMRTIIYQSDMRATDPVGGCYRYILDLQA
                *:******************** *:* :** **:**::*** **.***.***  * .** 

AT3G13850.1     QIEYTRNELEIVLQQLAMFRDRAHQHHHQEPHIQMQEQEDLSSFSSSCDLNNNNSIPYNY
gm021857_Glyma0 QIEYYRAELELVLQQLAIFRAQAQQQQQQQ-----QQQHGIYA--------PNN---VNI
                **** * ***:******:** :*:*:::*:     *:*..: :         **    * 

AT3G13850.1     PLNHIQEPNQQ-QYC--------SSGNNFSGLQEDM--WCLQ---LQDSSTIVNMKAGFI
gm021857_Glyma0 AVNGDGEPQQQEQYAMMHENGHGSQNSDGTAFQEQINTWAVQNTAVSLSSLSLQGQGSNV
                .:*   **:** **.        *...: :.:**::  *.:*   :. **  :: :.. :

AT3G13850.1     DECEDVKPVEEV---SSERHEFEPHEAFVEQRKLDLPSAQYIISS
gm021857_Glyma0 SDGYDHKPVLGIDMDSDER--------------------------
                .:  * ***  :   *.**
BoxShade v3.31 C (beta, 970507) Output
AT3G13850.1     M P S G K P S S V F P L H P K P T P L K P S S S T S S S N N N S T N Q A C A A C K Y Q R R K C A P D C L L A P Y F P H D
gm021857_Glyma0    M N N N N P N N - - - - - - - - - - - N S N R I S S P R N G N S T T Q A C A A C K Y Q R R K C A P D C I L A P Y F P H E
 
AT3G13850.1     R H R Q F L N A H K L F G V S N I T K I I K S L T P P E K D A A M H T I M F Q S D A R A N D P V D G C Y G I I K K L Q Y
gm021857_Glyma0    R Q R Q F L N A H K L F G V S N I T K I I K L L S P Q D K D Q A M R T I I Y Q S D M R A T D P V G G C Y R Y I L D L Q A
 
AT3G13850.1     Q I E Y T R N E L E I V L Q Q L A M F R D R A H Q H H H Q E P H I Q M Q E Q E D L S S F S S S C D L N N N N S I P Y N Y
gm021857_Glyma0    Q I E Y Y R A E L E L V L Q Q L A I F R A Q A Q Q Q Q Q Q Q - - - - - Q Q Q H G I Y A - - - - - - - - P N N - - - V N I
 
AT3G13850.1     P L N H I Q E P N Q Q - Q Y C - - - - - - - - S S G N N F S G L Q E D M - - W C L Q - - - L Q D S S T I V N M K A G F I
gm021857_Glyma0    A V N G D G E P Q Q Q E Q Y A M M H E N G H G S Q N S D G T A F Q E Q I N T W A V Q N T A V S L S S L S L Q G Q G S N V
 
AT3G13850.1     D E C E D V K P V E E V - - - S S E R H E F E P H E A F V E Q R K L D L P S A Q Y I I S S
gm021857_Glyma0    S D G Y D H K P V L G I D M D S D E R - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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