fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G13890.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt030018 not found in 367aa AT3G13890.2 1st_1st 0.382126348 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G13890.2     MGHHSCCNKQKVKRGLWSPEEDEKLINYINSYGHGCWSSVPKHAGLQRCGKSCRLRWINY
pt030018_POPTR_ MGHHSCCNKQKVKRGLWSPEEDEKLANYISTYGHGCWSSVPKLAGLQRCGKSCRLRWINY
                ************************* ***.:*********** *****************

AT3G13890.2     LRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLMSHH
pt030018_POPTR_ LRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLIS--
                ********************************************************:*  

AT3G13890.2     HHGHHHHHLSSMASLLTNLPYHNGFNPTTVDDESSRFMSNIITNTNPNFITPSH------
pt030018_POPTR_ -----HDQVPALAA-FTDYIVHN----SSVPEEA--FLS---LNANPNLIMTAHHHDHHQ
                     *.::.::*: :*:   **    ::* :*:  *:*    *:***:* .:*      

AT3G13890.2     LSLPSPHVMTPLMFPTSREGDFKFLTTNNPNQSHHHDNNHYN-NLDILSP-TPTINNHHQ
pt030018_POPTR_ LYLPSPTS----ILQSFGHGDFKL---NQP--------NNYNVDLPHLSPATPLI----P
                * ****      :: :  .****:   *:*        *:** :*  *** ** *     

AT3G13890.2     PSL--SSCPHDNNLQWPALP--------DFPASTISGF--------------QETLQ---
pt030018_POPTR_ PPLNDNSSSFDPGWSLPYLPQHLDQNQEDHHQSLSNGAIPVHYIGEKVVTHDQSTINATM
                *.*  .*...* . . * **        *.  *  .*               *.*::   

AT3G13890.2     DYDDANKLNVFVTPFNDNAKKLLCGEVLEGKVL----SSSS------PISQDHGLFLPT-
pt030018_POPTR_ SYDNQSMM-VSMMP------KLF--EIIEGNVCRMPPSSESQNTVHDPLARLSS--LPSG
                .**: . : * : *      **:  *::**:*     **.*      *:::  .  **: 

AT3G13890.2     TYNFQMTSTSDHQHHHRVDSYINHMIIPSSSSS----SPISCGQYVIT---------
pt030018_POPTR_ PYPVHEVATSQLE---SIDAIMSSLSAYSSSSSSSSLSPFSSSQFVANPHLPSSWDA
                .* .: .:**: :    :*: :. :   *****    **:*..*:* .
BoxShade v3.31 C (beta, 970507) Output
AT3G13890.2     M G H H S C C N K Q K V K R G L W S P E E D E K L I N Y I N S Y G H G C W S S V P K H A G L Q R C G K S C R L R W I N Y
pt030018_POPTR_    M G H H S C C N K Q K V K R G L W S P E E D E K L A N Y I S T Y G H G C W S S V P K L A G L Q R C G K S C R L R W I N Y
 
AT3G13890.2     L R P D L K R G S F S P Q E A A L I I E L H S I L G N R W A Q I A K H L P G R T D N E V K N F W N S S I K K K L M S H H
pt030018_POPTR_    L R P D L K R G S F S P Q E A A L I I E L H S I L G N R W A Q I A K H L P G R T D N E V K N F W N S S I K K K L I S - -
 
AT3G13890.2     H H G H H H H H L S S M A S L L T N L P Y H N G F N P T T V D D E S S R F M S N I I T N T N P N F I T P S H - - - - - -
pt030018_POPTR_    - - - - - H D Q V P A L A A - F T D Y I V H N - - - - S S V P E E A - - F L S - - - L N A N P N L I M T A H H H D H H Q
 
AT3G13890.2     L S L P S P H V M T P L M F P T S R E G D F K F L T T N N P N Q S H H H D N N H Y N - N L D I L S P - T P T I N N H H Q
pt030018_POPTR_    L Y L P S P T S - - - - I L Q S F G H G D F K L - - - N Q P - - - - - - - - N N Y N V D L P H L S P A T P L I - - - - P
 
AT3G13890.2     P S L - - S S C P H D N N L Q W P A L P - - - - - - - - D F P A S T I S G F - - - - - - - - - - - - - - Q E T L Q - - -
pt030018_POPTR_    P P L N D N S S S F D P G W S L P Y L P Q H L D Q N Q E D H H Q S L S N G A I P V H Y I G E K V V T H D Q S T I N A T M
 
AT3G13890.2     D Y D D A N K L N V F V T P F N D N A K K L L C G E V L E G K V L - - - - S S S S - - - - - - P I S Q D H G L F L P T -
pt030018_POPTR_    S Y D N Q S M M - V S M M P - - - - - - K L F - - E I I E G N V C R M P P S S E S Q N T V H D P L A R L S S - - L P S G
 
AT3G13890.2     T Y N F Q M T S T S D H Q H H H R V D S Y I N H M I I P S S S S S - - - - S P I S C G Q Y V I T - - - - - - - - -
pt030018_POPTR_    P Y P V H E V A T S Q L E - - - S I D A I M S S L S A Y S S S S S S S S L S P F S S S Q F V A N P H L P S S W D A
 
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