fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G13890.2 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm038179 not found in 248aa AT3G13890.2 1st_1st 0.380585516 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G13890.2     MGHHSCCNKQKVKRGLWSPEEDEKLINYINSYGHGCWSSVPKHAGLQRCGKSCRLRWINY
gm038179_Glyma1 MGHHSCCNKQKVKRGLWSPEEDEKLINYITTYGHGCWSSVPKLAGLQRCGKSCRLRWINY
                *****************************.:*********** *****************

AT3G13890.2     LRPDLKRGSFSPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLMSHH
gm038179_Glyma1 LRPDLKRGSFTPQEAALIIELHSILGNRWAQIAKHLPGRTDNEVKNFWNSSIKKKLLSHD
                **********:*********************************************:**.

AT3G13890.2     HHGHHHHHLSSMASLLTNLPYHNGFNPTTVDDESSRFMSNIITNTNPNFITPSHLSLPSP
gm038179_Glyma1 -------------------------------------------------VVPS-LATFSD
                                                                 :.** *:  * 

AT3G13890.2     HVMTPLMFPTSREGDFKFLTTNNPNQSHHHDNNHYNNLDILSPTPTIN--NHHQPSLSSC
gm038179_Glyma1 HIHGP---PNGSMESFFPLTDNPILNSHHHLDQLF--LPII-PSPILQAFDHHH------
                *:  *   *..   .*  ** *   :**** :: :  * *: *:* ::  :**:      

AT3G13890.2     PHDNNLQWPALPDFPASTISGFQETLQDYDDANKLNVFVTPFND--NAKKLLCGEVLEGK
gm038179_Glyma1 -HNNDIK---------IDINKFFN-----NNANFLQYFQNPMPETTNMWKLL--------
                 *:*:::           *. * :     ::** *: * .*: :  *  ***        

AT3G13890.2     VLSSSSPISQDHGLFL-PTTYNFQMTSTSDH-----QHHHRVDSYINHMIIPSSSSSSPI
gm038179_Glyma1 --------RVSHLLFVHKIKWSTLMPSSCHHCHPQQQHLHQ-------------------
                          .* **:   .:.  *.*:..*     ** *:                   

AT3G13890.2     SCGQYVIT
gm038179_Glyma1 --------
BoxShade v3.31 C (beta, 970507) Output
AT3G13890.2     M G H H S C C N K Q K V K R G L W S P E E D E K L I N Y I N S Y G H G C W S S V P K H A G L Q R C G K S C R L R W I N Y
gm038179_Glyma1    M G H H S C C N K Q K V K R G L W S P E E D E K L I N Y I T T Y G H G C W S S V P K L A G L Q R C G K S C R L R W I N Y
 
AT3G13890.2     L R P D L K R G S F S P Q E A A L I I E L H S I L G N R W A Q I A K H L P G R T D N E V K N F W N S S I K K K L M S H H
gm038179_Glyma1    L R P D L K R G S F T P Q E A A L I I E L H S I L G N R W A Q I A K H L P G R T D N E V K N F W N S S I K K K L L S H D
 
AT3G13890.2     H H G H H H H H L S S M A S L L T N L P Y H N G F N P T T V D D E S S R F M S N I I T N T N P N F I T P S H L S L P S P
gm038179_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V V P S - L A T F S D
 
AT3G13890.2     H V M T P L M F P T S R E G D F K F L T T N N P N Q S H H H D N N H Y N N L D I L S P T P T I N - - N H H Q P S L S S C
gm038179_Glyma1    H I H G P - - - P N G S M E S F F P L T D N P I L N S H H H L D Q L F - - L P I I - P S P I L Q A F D H H H - - - - - -
 
AT3G13890.2     P H D N N L Q W P A L P D F P A S T I S G F Q E T L Q D Y D D A N K L N V F V T P F N D - - N A K K L L C G E V L E G K
gm038179_Glyma1    - H N N D I K - - - - - - - - - I D I N K F F N - - - - - N N A N F L Q Y F Q N P M P E T T N M W K L L - - - - - - - -
 
AT3G13890.2     V L S S S S P I S Q D H G L F L - P T T Y N F Q M T S T S D H - - - - - Q H H H R V D S Y I N H M I I P S S S S S S P I
gm038179_Glyma1    - - - - - - - - R V S H L L F V H K I K W S T L M P S S C H H C H P Q Q Q H L H Q - - - - - - - - - - - - - - - - - - -
 
AT3G13890.2     S C G Q Y V I T
gm038179_Glyma1    - - - - - - - -
 
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