fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15030.1 NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.1
NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.2
NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm033704 DLGQQDLRLSLQSFQD in 203/371 AT1G53230.1 1st_not 0.407670454 II
Pt032683 SSQSQDLRLSLQSFQE in 218/414 AT3G15030.2 1st_not 0.464488636 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G15030.1     MSDDQ---FHH---PPPPSSMRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHSKVCT
gm033704_Glyma1 MGEPQHPHQHHQQAAATPSRAAMRG------GGGGEIVEVQGGHIVRSTGRKDRHSKVCT
pt032683_POPTR_ MGE-----SHHQ--AATSSRLGIR-------NTVGEIVEVQGGHIVRSTGRKDRHSKVCT
                *.:      **   ....*    *       .  **************************

AT3G15030.1     AKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELAELPPWNPADA
gm033704_Glyma1 AKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDQLAELPPWNPT--
pt032683_POPTR_ AKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKASIDELAELPAWDPTTA
                ***********:***************:***************::**:*****.*:*:  

AT3G15030.1     IRLAAANAKPRRTTAKTQISP------------------SPPPPQQQQQQQQLQFGVGFN
gm033704_Glyma1 ------------ATPMQPPSQE------IPSVAAARAPLSPRLLEIQN--NSL-------
pt032683_POPTR_ GFTRATSKTTTRSTQQQNISDEREYQLSMENVAASKAA-AAAAIEVQNMQQQM-------
                            :*     *                   :.   : *:  :.:       

AT3G15030.1     GGGAEHPS------NNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPSNHNLMHNYHHQ
gm033704_Glyma1 ---THNSSSISIKYNSGSGFLPASLDTDNIAETIKTFFPV-EATTTS------FQSYP-P
pt032683_POPTR_ ---AENP-------DCSSGFLPPSLDSDAIADTIKTFFPM-GASTETSSPTIQFQNY---
                   :.:.       :  *.***.*:*:* **:***:***:  ::* :      ::.*   

AT3G15030.1     HPPDLLSRTNSQNQDLRLSLQSFPDGPPSLLHHQHHHHTSASASEPTLFYGQS-NPLGFD
gm033704_Glyma1 APPDL------GQQDLRLSLQSFQD--PIMLHHQPQSH-----HEPVLFAGTAAAALGFD
pt032683_POPTR_ -PPDLLSRTSSQSQDLRLSLQSFQE--PILLQHQAHHHGHQAQNEHQVFSGTTAHYLGLD
                 ****       .********** :  * :*:** : *      *  :* * :   **:*

AT3G15030.1     --TSSWEQQ--SSEFGRIQR-LVAWNSGGGGGATDTGNGGGFLFAPPTPSTTSF------
gm033704_Glyma1 G-GYGWSEHQHQNHHSEEQRLLYA-----GGNS---GHGGGFVFNTPAP-----------
pt032683_POPTR_ GSSSGWSEQHHTPEINRFQRNLVAWNAAGGGGG---GGGGGFFFNTPLPPLQTMSPSPLI
                    .*.::    . .. ** * *     **..   * ****.* .* *           

AT3G15030.1     QPVLGQSQQLYSQRGPLQSSYSPMIRAWFDP---HHHHQSISTDDLNHHHHLPPPVHQ-S
gm033704_Glyma1 VPAFG---QFFSQRGPLQSSNTPSIRAWIDPSVDHHHH---------HHHYLSQLIHQGS
pt032683_POPTR_ QPFFGQ-NQFFSQRGPLQSSNMPSVRAWIDPAITPDHH---------EQQQIPQIYHQQT
                 * :*   *::*********  * :***:**    .**         .:: :.   ** :

AT3G15030.1     AIPGIGFASG--EFSSGFRIPARFQGQEEEQHDGLTHKPSSASSISRH
gm033704_Glyma1 VAGGSGFSSG---F-SGFRIPARIQG-E-EEHDGVSDKPSSASSDSRH
pt032683_POPTR_ AISGIGFTASGGEF-YGFRVPARIQG-EDEEHDGIHNKPSSASSDSRH
                .  * **::.   *  ***:***:** * *:***: .******* ***
BoxShade v3.31 C (beta, 970507) Output
AT3G15030.1     M S D D Q - - - F H H - - - P P P P S S M R H R S T S D A A D G G C G E I V E V Q G G H I V R S T G R K D R H S K V C T
gm033704_Glyma1    M G E P Q H P H Q H H Q Q A A A T P S R A A M R G - - - - - - G G G G E I V E V Q G G H I V R S T G R K D R H S K V C T
pt032683_POPTR_    M G E - - - - - S H H Q - - A A T S S R L G I R - - - - - - - N T V G E I V E V Q G G H I V R S T G R K D R H S K V C T
 
AT3G15030.1     A K G P R D R R V R L S A H T A I Q F Y D V Q D R L G F D R P S K A V D W L I K K A K T S I D E L A E L P P W N P A D A
gm033704_Glyma1    A K G P R D R R V R L A A H T A I Q F Y D V Q D R L G Y D R P S K A V D W L I K K A K A A I D Q L A E L P P W N P T - -
pt032683_POPTR_    A K G P R D R R V R L S A H T A I Q F Y D V Q D R L G Y D R P S K A V D W L I K K A K A S I D E L A E L P A W D P T T A
 
AT3G15030.1     I R L A A A N A K P R R T T A K T Q I S P - - - - - - - - - - - - - - - - - - S P P P P Q Q Q Q Q Q Q Q L Q F G V G F N
gm033704_Glyma1    - - - - - - - - - - - - A T P M Q P P S Q E - - - - - - I P S V A A A R A P L S P R L L E I Q N - - N S L - - - - - - -
pt032683_POPTR_    G F T R A T S K T T T R S T Q Q Q N I S D E R E Y Q L S M E N V A A S K A A - A A A A I E V Q N M Q Q Q M - - - - - - -
 
AT3G15030.1     G G G A E H P S - - - - - - N N E S S F L P P S M D S D S I A D T I K S F F P V I G S S T E A P S N H N L M H N Y H H Q
gm033704_Glyma1    - - - T H N S S S I S I K Y N S G S G F L P A S L D T D N I A E T I K T F F P V - E A T T T S - - - - - - F Q S Y P - P
pt032683_POPTR_    - - - A E N P - - - - - - - D C S S G F L P P S L D S D A I A D T I K T F F P M - G A S T E T S S P T I Q F Q N Y - - -
 
AT3G15030.1     H P P D L L S R T N S Q N Q D L R L S L Q S F P D G P P S L L H H Q H H H H T S A S A S E P T L F Y G Q S - N P L G F D
gm033704_Glyma1    A P P D L - - - - - - G Q Q D L R L S L Q S F Q D - - P I M L H H Q P Q S H - - - - - H E P V L F A G T A A A A L G F D
pt032683_POPTR_    - P P D L L S R T S S Q S Q D L R L S L Q S F Q E - - P I L L Q H Q A H H H G H Q A Q N E H Q V F S G T T A H Y L G L D
 
AT3G15030.1     - - T S S W E Q Q - - S S E F G R I Q R - L V A W N S G G G G G A T D T G N G G G F L F A P P T P S T T S F - - - - - -
gm033704_Glyma1    G - G Y G W S E H Q H Q N H H S E E Q R L L Y A - - - - - G G N S - - - G H G G G F V F N T P A P - - - - - - - - - - -
pt032683_POPTR_    G S S S G W S E Q H H T P E I N R F Q R N L V A W N A A G G G G G - - - G G G G G F F F N T P L P P L Q T M S P S P L I
 
AT3G15030.1     Q P V L G Q S Q Q L Y S Q R G P L Q S S Y S P M I R A W F D P - - - H H H H Q S I S T D D L N H H H H L P P P V H Q - S
gm033704_Glyma1    V P A F G - - - Q F F S Q R G P L Q S S N T P S I R A W I D P S V D H H H H - - - - - - - - - H H H Y L S Q L I H Q G S
pt032683_POPTR_    Q P F F G Q - N Q F F S Q R G P L Q S S N M P S V R A W I D P A I T P D H H - - - - - - - - - E Q Q Q I P Q I Y H Q Q T
 
AT3G15030.1     A I P G I G F A S G - - E F S S G F R I P A R F Q G Q E E E Q H D G L T H K P S S A S S I S R H
gm033704_Glyma1    V A G G S G F S S G - - - F - S G F R I P A R I Q G - E - E E H D G V S D K P S S A S S D S R H
pt032683_POPTR_    A I S G I G F T A S G G E F - Y G F R V P A R I Q G - E D E E H D G I H N K P S S A S S D S R H
 
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