fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15030.1 NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.1
NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.2
NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt024326 SSQSQDLRLSLLSFQG in 214/408 AT3G15030.2 not_not 0.447443181 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G15030.1     MSDDQFHHPPPPSSMRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRD
pt024326_POPTR_ MGES--HHQAATSSRLGISNT------VGEIVEVQGGLIVRPTGRKDRHSKVCTAKGPRD
                *.:.  ** ...**    *.:       ********* ***.******************

AT3G15030.1     RRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELAELPPWNPADAIRLAAA
pt024326_POPTR_ RRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTSIDELAELPAWDPTTAGFTPKT
                *********************:*************************.*:*: *   . :

AT3G15030.1     NAKPRRTTAKTQIS------------PSPPPPQQQQQQQQLQFGVGFNGGGAEHPSNNES
pt024326_POPTR_ SKTATRSTKQQNICDEKEYGLSVENVATSKIAEVQNTQQQM----------AENP-NSSL
                . .. *:* : :*.            .:.  .: *: ***:          **:* *.. 

AT3G15030.1     SFLPPSMDSDSIADTIKSFFPVIGSSTEAPSNHNLMHNYHHQHPPDLLSRTNSQNQDLRL
pt024326_POPTR_ GFLPPSLESDVIADTIKTFFPILGASTETSSPTIQFQNY----PPDLMSRTSSQSQDLRL
                .*****::** ******:***::*:***:.*    ::**    ****:***.**.*****

AT3G15030.1     SLQSFPDGPPSLLHHQHHHHTSASASEPTLFYGQS-NPLGFDTSS--WEQQ--SSEFGRI
pt024326_POPTR_ SLLSFQG--PILLQHQAHHHGHQAQSEHQVFSGTTAHHVGFDCSSGGWSEQHYPQEITRF
                ** ** .  * **:** ***   : **  :* * : : :*** **  *.:*  ..*: *:

AT3G15030.1     QR-LVAWN-----SGGGGGATDTGNGGGFLFAPPTPSTTSF------QPVLGQSQQLYSQ
pt024326_POPTR_ QRNLVAWNAADAGSGGGGSA-------GLIFNAPLPPPQTMPPSPLVQPFFGQN-QFFSQ
                ** *****     *****.*       *::* .* *.. ::      **.:**. *::**

AT3G15030.1     RGPLQSSYSPMIRAWFDPHHHHQSISTDDLNHHHHLPPPVHQSAIPGIGFAS--GEFSSG
pt024326_POPTR_ RGTLQSSNTPSFRAWIDP-----AITPD---HHLQLQQQQQQTAISGIGFTASDGGF-SG
                **.**** :* :***:**     :*:.*   ** :*    :*:**.****::  * * **

AT3G15030.1     FRIPARFQGQEEEQHDGLTHKPSSASSISRH
pt024326_POPTR_ FRVPTRIQGEEEER-DGIHNKPSSASSDSRS
                **:*:*:**:***: **: :******* **
BoxShade v3.31 C (beta, 970507) Output
AT3G15030.1     M S D D Q F H H P P P P S S M R H R S T S D A A D G G C G E I V E V Q G G H I V R S T G R K D R H S K V C T A K G P R D
pt024326_POPTR_    M G E S - - H H Q A A T S S R L G I S N T - - - - - - V G E I V E V Q G G L I V R P T G R K D R H S K V C T A K G P R D
 
AT3G15030.1     R R V R L S A H T A I Q F Y D V Q D R L G F D R P S K A V D W L I K K A K T S I D E L A E L P P W N P A D A I R L A A A
pt024326_POPTR_    R R V R L S A H T A I Q F Y D V Q D R L G Y D R P S K A V D W L I K K A K T S I D E L A E L P A W D P T T A G F T P K T
 
AT3G15030.1     N A K P R R T T A K T Q I S - - - - - - - - - - - - P S P P P P Q Q Q Q Q Q Q Q L Q F G V G F N G G G A E H P S N N E S
pt024326_POPTR_    S K T A T R S T K Q Q N I C D E K E Y G L S V E N V A T S K I A E V Q N T Q Q Q M - - - - - - - - - - A E N P - N S S L
 
AT3G15030.1     S F L P P S M D S D S I A D T I K S F F P V I G S S T E A P S N H N L M H N Y H H Q H P P D L L S R T N S Q N Q D L R L
pt024326_POPTR_    G F L P P S L E S D V I A D T I K T F F P I L G A S T E T S S P T I Q F Q N Y - - - - P P D L M S R T S S Q S Q D L R L
 
AT3G15030.1     S L Q S F P D G P P S L L H H Q H H H H T S A S A S E P T L F Y G Q S - N P L G F D T S S - - W E Q Q - - S S E F G R I
pt024326_POPTR_    S L L S F Q G - - P I L L Q H Q A H H H G H Q A Q S E H Q V F S G T T A H H V G F D C S S G G W S E Q H Y P Q E I T R F
 
AT3G15030.1     Q R - L V A W N - - - - - S G G G G G A T D T G N G G G F L F A P P T P S T T S F - - - - - - Q P V L G Q S Q Q L Y S Q
pt024326_POPTR_    Q R N L V A W N A A D A G S G G G G S A - - - - - - - G L I F N A P L P P P Q T M P P S P L V Q P F F G Q N - Q F F S Q
 
AT3G15030.1     R G P L Q S S Y S P M I R A W F D P H H H H Q S I S T D D L N H H H H L P P P V H Q S A I P G I G F A S - - G E F S S G
pt024326_POPTR_    R G T L Q S S N T P S F R A W I D P - - - - - A I T P D - - - H H L Q L Q Q Q Q Q Q T A I S G I G F T A S D G G F - S G
 
AT3G15030.1     F R I P A R F Q G Q E E E Q H D G L T H K P S S A S S I S R H
pt024326_POPTR_    F R V P T R I Q G E E E E R - D G I H N K P S S A S S D S R S
 
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