fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15030.1 NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.1
NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.2
NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032683 SSQSQDLRLSLQSFQE in 218/414 AT3G15030.2 1st_not 0.464488636 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G15030.1     MSDDQFHHPPPPSS-MRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPR
pt032683_POPTR_ MGES--HHQAATSSRLGIRNT-------VGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPR
                *.:.  ** ...** :  *.*        *******************************

AT3G15030.1     DRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELAELPPWNPADAIRLAA
pt032683_POPTR_ DRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKASIDELAELPAWDPTTAGFTRA
                **********************:***************:*********.*:*: *    *

AT3G15030.1     ANAKPRRTTAKTQIS-----------------PSPPPPQQQQQQQQLQFGVGFNGGGAEH
pt032683_POPTR_ TSKTTTRSTQQQNISDEREYQLSMENVAASKAAAAAAIEVQNMQQQM----------AEN
                :. .. *:* : :**                 .:... : *: ***:          **:

AT3G15030.1     PSNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPSNHNLMHNYHHQHPPDLLSRTNSQ
pt032683_POPTR_ P-DCSSGFLPPSLDSDAIADTIKTFFP-MGASTETSSPTIQFQNY----PPDLLSRTSSQ
                * : .*.*****:***:******:*** :*:***:.*    ::**    ********.**

AT3G15030.1     NQDLRLSLQSFPDGPPSLLHHQHHHHTSASASEPTLFYGQS-NPLGFDTSS--WEQQ--S
pt032683_POPTR_ SQDLRLSLQSFQE--PILLQHQAHHHGHQAQNEHQVFSGTTAHYLGLDGSSSGWSEQHHT
                .********** :  * **:** ***   : .*  :* * : : **:* **  *.:*  :

AT3G15030.1     SEFGRIQR-LVAWNSGGGGGATDTGNGGGFLFAPPTPSTTSF------QPVLGQSQQLYS
pt032683_POPTR_ PEINRFQRNLVAWNAAGGGGG---GGGGGFFFNTPLPPLQTMSPSPLIQPFFGQN-QFFS
                .*:.*:** *****:.****.   *.****:* .* *.  ::      **.:**. *::*

AT3G15030.1     QRGPLQSSYSPMIRAWFDP-----HHHHQSISTDDLNHHHHLPPPVH-QSAIPGIGFAS-
pt032683_POPTR_ QRGPLQSSNMPSVRAWIDPAITPDHHEQQQI-----------PQIYHQQTAISGIGFTAS
                ********  * :***:**     **.:*.*           *   * *:**.****:: 

AT3G15030.1     -GEFSSGFRIPARFQGQEEEQHDGLTHKPSSASSISRH
pt032683_POPTR_ GGEF-YGFRVPARIQG-EDEEHDGIHNKPSSASSDSRH
                 ***  ***:***:** *:*:***: :******* ***
BoxShade v3.31 C (beta, 970507) Output
AT3G15030.1     M S D D Q F H H P P P P S S - M R H R S T S D A A D G G C G E I V E V Q G G H I V R S T G R K D R H S K V C T A K G P R
pt032683_POPTR_    M G E S - - H H Q A A T S S R L G I R N T - - - - - - - V G E I V E V Q G G H I V R S T G R K D R H S K V C T A K G P R
 
AT3G15030.1     D R R V R L S A H T A I Q F Y D V Q D R L G F D R P S K A V D W L I K K A K T S I D E L A E L P P W N P A D A I R L A A
pt032683_POPTR_    D R R V R L S A H T A I Q F Y D V Q D R L G Y D R P S K A V D W L I K K A K A S I D E L A E L P A W D P T T A G F T R A
 
AT3G15030.1     A N A K P R R T T A K T Q I S - - - - - - - - - - - - - - - - - P S P P P P Q Q Q Q Q Q Q Q L Q F G V G F N G G G A E H
pt032683_POPTR_    T S K T T T R S T Q Q Q N I S D E R E Y Q L S M E N V A A S K A A A A A A I E V Q N M Q Q Q M - - - - - - - - - - A E N
 
AT3G15030.1     P S N N E S S F L P P S M D S D S I A D T I K S F F P V I G S S T E A P S N H N L M H N Y H H Q H P P D L L S R T N S Q
pt032683_POPTR_    P - D C S S G F L P P S L D S D A I A D T I K T F F P - M G A S T E T S S P T I Q F Q N Y - - - - P P D L L S R T S S Q
 
AT3G15030.1     N Q D L R L S L Q S F P D G P P S L L H H Q H H H H T S A S A S E P T L F Y G Q S - N P L G F D T S S - - W E Q Q - - S
pt032683_POPTR_    S Q D L R L S L Q S F Q E - - P I L L Q H Q A H H H G H Q A Q N E H Q V F S G T T A H Y L G L D G S S S G W S E Q H H T
 
AT3G15030.1     S E F G R I Q R - L V A W N S G G G G G A T D T G N G G G F L F A P P T P S T T S F - - - - - - Q P V L G Q S Q Q L Y S
pt032683_POPTR_    P E I N R F Q R N L V A W N A A G G G G G - - - G G G G G F F F N T P L P P L Q T M S P S P L I Q P F F G Q N - Q F F S
 
AT3G15030.1     Q R G P L Q S S Y S P M I R A W F D P - - - - - H H H H Q S I S T D D L N H H H H L P P P V H - Q S A I P G I G F A S -
pt032683_POPTR_    Q R G P L Q S S N M P S V R A W I D P A I T P D H H E Q Q Q I - - - - - - - - - - - P Q I Y H Q Q T A I S G I G F T A S
 
AT3G15030.1     - G E F S S G F R I P A R F Q G Q E E E Q H D G L T H K P S S A S S I S R H
pt032683_POPTR_    G G E F - Y G F R V P A R I Q G - E D E E H D G I H N K P S S A S S D S R H
 
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