fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15030.1 NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.1
NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.2
NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt032683 SSQSQDLRLSLQSFQE in 218/414 AT3G15030.2 1st_not 0.464488636 II
Pt024326 SSQSQDLRLSLLSFQG in 214/408 AT3G15030.2 not_not 0.447443181 III
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G15030.1     MSDDQFHHPPPPSSMRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRD
pt024326_POPTR_ MGES--HHQAATSSRLGISNT------VGEIVEVQGGLIVRPTGRKDRHSKVCTAKGPRD
pt032683_POPTR_ MGES--HHQAATSSRLGIRNT------VGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRD
                *.:.  ** ...**     .:       ********* ***.******************

AT3G15030.1     RRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELAELPPWNPADAIRLAAA
pt024326_POPTR_ RRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKTSIDELAELPAWDPTTAGFTPKT
pt032683_POPTR_ RRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKASIDELAELPAWDPTTAGFTRAT
                *********************:***************:*********.*:*: *     :

AT3G15030.1     NAKPRRTTAKTQISPS-----------------PPPPQQQQQQQQLQFGVGFNGGGAEHP
pt024326_POPTR_ SKTATRSTKQQNICDEKEYGLSVENVATSKIA-----EVQNTQQQM----------AENP
pt032683_POPTR_ SKTTTRSTQQQNISDEREYQLSMENVAASKAAAAAAIEVQNMQQQM----------AENP
                . .. *:* : :*. .                     : *: ***:          **:*

AT3G15030.1     SNNESSFLPPSMDSDSIADTIKSFFPVIGSSTEAPSNHNLMHNYHHQHPPDLLSRTNSQN
pt024326_POPTR_ -NSSLGFLPPSLESDVIADTIKTFFPILGASTETSSPTIQFQNY----PPDLMSRTSSQS
pt032683_POPTR_ -DCSSGFLPPSLDSDAIADTIKTFFP-MGASTETSSPTIQFQNY----PPDLLSRTSSQS
                 : . .*****::** ******:*** :*:***:.*    ::**    ****:***.**.

AT3G15030.1     QDLRLSLQSFPDGPPSLLHHQHHHHTSASASEPTLFYGQS-NPLGFDTSS--WEQQ--SS
pt024326_POPTR_ QDLRLSLLSFQG--PILLQHQAHHHGHQAQSEHQVFSGTTAHHVGFDCSSGGWSEQHYPQ
pt032683_POPTR_ QDLRLSLQSFQE--PILLQHQAHHHGHQAQNEHQVFSGTTAHYLGLDGSSSGWSEQHHTP
                ******* **    * **:** ***   : .*  :* * : : :*:* **  *.:*  . 

AT3G15030.1     EFGRIQR-LVAWNS--GGGGGATDTGNGGGFLFAPPTPSTTSF------QPVLGQSQQLY
pt024326_POPTR_ EITRFQRNLVAWNAADAGSGG----GGSAGLIFNAPLPPPQTMPPSPLVQPFFGQN-QFF
pt032683_POPTR_ EINRFQRNLVAWNAA-GGGGG----GGGGGFFFNTPLPPLQTMSPSPLIQPFFGQN-QFF
                *: *:** *****:  .*.**    *...*::* .* *.  ::      **.:**. *::

AT3G15030.1     SQRGPLQSSYSPMIRAWFDPHHHHQSISTDDLNHHHHLPPPV---HQSAIPGIGFAS--G
pt024326_POPTR_ SQRGTLQSSNTPSFRAWIDP-----AITPD---HHLQLQQQQ---QQTAISGIGFTASDG
pt032683_POPTR_ SQRGPLQSSNMPSVRAWIDP-----AITPD---HHEQQQIPQIYHQQTAISGIGFTASGG
                ****.****  * .***:**     :*:.*   ** :        :*:**.****::  *

AT3G15030.1     EFSSGFRIPARFQGQEEEQHDGLTHKPSSASSISRH
pt024326_POPTR_ GF-SGFRVPTRIQG-EEEERDGIHNKPSSASSDSRS
pt032683_POPTR_ EF-YGFRVPARIQG-EDEEHDGIHNKPSSASSDSRH
                 *  ***:*:*:** *:*::**: :******* **
BoxShade v3.31 C (beta, 970507) Output
AT3G15030.1     M S D D Q F H H P P P P S S M R H R S T S D A A D G G C G E I V E V Q G G H I V R S T G R K D R H S K V C T A K G P R D
pt024326_POPTR_    M G E S - - H H Q A A T S S R L G I S N T - - - - - - V G E I V E V Q G G L I V R P T G R K D R H S K V C T A K G P R D
pt032683_POPTR_    M G E S - - H H Q A A T S S R L G I R N T - - - - - - V G E I V E V Q G G H I V R S T G R K D R H S K V C T A K G P R D
 
AT3G15030.1     R R V R L S A H T A I Q F Y D V Q D R L G F D R P S K A V D W L I K K A K T S I D E L A E L P P W N P A D A I R L A A A
pt024326_POPTR_    R R V R L S A H T A I Q F Y D V Q D R L G Y D R P S K A V D W L I K K A K T S I D E L A E L P A W D P T T A G F T P K T
pt032683_POPTR_    R R V R L S A H T A I Q F Y D V Q D R L G Y D R P S K A V D W L I K K A K A S I D E L A E L P A W D P T T A G F T R A T
 
AT3G15030.1     N A K P R R T T A K T Q I S P S - - - - - - - - - - - - - - - - - P P P P Q Q Q Q Q Q Q Q L Q F G V G F N G G G A E H P
pt024326_POPTR_    S K T A T R S T K Q Q N I C D E K E Y G L S V E N V A T S K I A - - - - - E V Q N T Q Q Q M - - - - - - - - - - A E N P
pt032683_POPTR_    S K T T T R S T Q Q Q N I S D E R E Y Q L S M E N V A A S K A A A A A A I E V Q N M Q Q Q M - - - - - - - - - - A E N P
 
AT3G15030.1     S N N E S S F L P P S M D S D S I A D T I K S F F P V I G S S T E A P S N H N L M H N Y H H Q H P P D L L S R T N S Q N
pt024326_POPTR_    - N S S L G F L P P S L E S D V I A D T I K T F F P I L G A S T E T S S P T I Q F Q N Y - - - - P P D L M S R T S S Q S
pt032683_POPTR_    - D C S S G F L P P S L D S D A I A D T I K T F F P - M G A S T E T S S P T I Q F Q N Y - - - - P P D L L S R T S S Q S
 
AT3G15030.1     Q D L R L S L Q S F P D G P P S L L H H Q H H H H T S A S A S E P T L F Y G Q S - N P L G F D T S S - - W E Q Q - - S S
pt024326_POPTR_    Q D L R L S L L S F Q G - - P I L L Q H Q A H H H G H Q A Q S E H Q V F S G T T A H H V G F D C S S G G W S E Q H Y P Q
pt032683_POPTR_    Q D L R L S L Q S F Q E - - P I L L Q H Q A H H H G H Q A Q N E H Q V F S G T T A H Y L G L D G S S S G W S E Q H H T P
 
AT3G15030.1     E F G R I Q R - L V A W N S - - G G G G G A T D T G N G G G F L F A P P T P S T T S F - - - - - - Q P V L G Q S Q Q L Y
pt024326_POPTR_    E I T R F Q R N L V A W N A A D A G S G G - - - - G G S A G L I F N A P L P P P Q T M P P S P L V Q P F F G Q N - Q F F
pt032683_POPTR_    E I N R F Q R N L V A W N A A - G G G G G - - - - G G G G G F F F N T P L P P L Q T M S P S P L I Q P F F G Q N - Q F F
 
AT3G15030.1     S Q R G P L Q S S Y S P M I R A W F D P H H H H Q S I S T D D L N H H H H L P P P V - - - H Q S A I P G I G F A S - - G
pt024326_POPTR_    S Q R G T L Q S S N T P S F R A W I D P - - - - - A I T P D - - - H H L Q L Q Q Q Q - - - Q Q T A I S G I G F T A S D G
pt032683_POPTR_    S Q R G P L Q S S N M P S V R A W I D P - - - - - A I T P D - - - H H E Q Q Q I P Q I Y H Q Q T A I S G I G F T A S G G
 
AT3G15030.1     E F S S G F R I P A R F Q G Q E E E Q H D G L T H K P S S A S S I S R H
pt024326_POPTR_    G F - S G F R V P T R I Q G - E E E E R D G I H N K P S S A S S D S R S
pt032683_POPTR_    E F - Y G F R V P A R I Q G - E D E E H D G I H N K P S S A S S D S R H
 
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