fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15030.1 NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.1
NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.2
NSQNQDLRLSLQSFPD at 224/420 in AT3G15030.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm033704 DLGQQDLRLSLQSFQD in 203/371 AT1G53230.1 1st_not 0.407670454 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G15030.1     MSDDQFHHP----------PPPSSMRHRSTSDAADGGCGEIVEVQGGHIVRSTGRKDRHS
gm033704_Glyma1 MGEPQ--HPHQHHQQAAATPSRAAMR--------GGGGGEIVEVQGGHIVRSTGRKDRHS
                *.: *  **          *. ::**        .** **********************

AT3G15030.1     KVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGFDRPSKAVDWLIKKAKTSIDELAELPPWN
gm033704_Glyma1 KVCTAKGPRDRRVRLAAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKAAIDQLAELPPWN
                ***************:***************:***************::**:********

AT3G15030.1     PADAIRLAAANAKPRRTTAKTQISPSPPPPQQQQ-QQQQLQFGVGFNGGGAEHPSNNESS
gm033704_Glyma1 PTATPMQPPSQEIPSVAAARAPLSPRLLEIQNNSLTHNSSSISIKYNSG---------SG
                *: :   ..::  *  ::*:: :**     *::.  ::. .:.: :*.*         *.

AT3G15030.1     FLPPSMDSDSIADTIKSFFPVIGSSTEAPSNHNLMHNYHHQHPPDLLSRTNSQNQDLRLS
gm033704_Glyma1 FLPASLDTDNIAETIKTFFPVEATTTSFQS--------YPPAPPDL------GQQDLRLS
                ***.*:*:*.**:***:**** .::*.  *        :   ****       :******

AT3G15030.1     LQSFPDGPPSLLHHQ-HHHHTSASASEPTLFYGQ-SNPLGFDTS---SWEQQSSEFGRIQ
gm033704_Glyma1 LQSFQD--PIMLHHQPQSHH------EPVLFAGTAAAALGFDGGYGWSEHQHQNHHSEEQ
                **** *  * :**** : **      **.** *  : .**** .   * .*:...... *

AT3G15030.1     RLVAWNSGGGGGATDTGNGGGFLFAPPTPSTTSFQPVLGQSQQLYSQRGPLQSSYSPMIR
gm033704_Glyma1 RLLY--AGG-----NSGHGGGFVFNTPAPV-----PAFG---QFFSQRGPLQSSNTPSIR
                **:   :**     ::*:****:* .*:*      *.:*   *::********* :* **

AT3G15030.1     AWFDP---HHHHQSISTDDLNHHHHLPPPVHQSAIP-GIGFASGEFSSGFRIPARFQGQE
gm033704_Glyma1 AWIDPSVDHHHH---------HHHYLSQLIHQGSVAGGSGFSSG--FSGFRIPARIQG--
                **:**   ****         ***:*.  :**.::. * **:**   ********:**  

AT3G15030.1     EEQHDGLTHKPSSASSISRH
gm033704_Glyma1 EEEHDGVSDKPSSASSDSRH
                **:***::.******* ***
BoxShade v3.31 C (beta, 970507) Output
AT3G15030.1     M S D D Q F H H P - - - - - - - - - - P P P S S M R H R S T S D A A D G G C G E I V E V Q G G H I V R S T G R K D R H S
gm033704_Glyma1    M G E P Q - - H P H Q H H Q Q A A A T P S R A A M R - - - - - - - - G G G G G E I V E V Q G G H I V R S T G R K D R H S
 
AT3G15030.1     K V C T A K G P R D R R V R L S A H T A I Q F Y D V Q D R L G F D R P S K A V D W L I K K A K T S I D E L A E L P P W N
gm033704_Glyma1    K V C T A K G P R D R R V R L A A H T A I Q F Y D V Q D R L G Y D R P S K A V D W L I K K A K A A I D Q L A E L P P W N
 
AT3G15030.1     P A D A I R L A A A N A K P R R T T A K T Q I S P S P P P P Q Q Q Q - Q Q Q Q L Q F G V G F N G G G A E H P S N N E S S
gm033704_Glyma1    P T A T P M Q P P S Q E I P S V A A A R A P L S P R L L E I Q N N S L T H N S S S I S I K Y N S G - - - - - - - - - S G
 
AT3G15030.1     F L P P S M D S D S I A D T I K S F F P V I G S S T E A P S N H N L M H N Y H H Q H P P D L L S R T N S Q N Q D L R L S
gm033704_Glyma1    F L P A S L D T D N I A E T I K T F F P V E A T T T S F Q S - - - - - - - - Y P P A P P D L - - - - - - G Q Q D L R L S
 
AT3G15030.1     L Q S F P D G P P S L L H H Q - H H H H T S A S A S E P T L F Y G Q - S N P L G F D T S - - - S W E Q Q S S E F G R I Q
gm033704_Glyma1    L Q S F Q D - - P I M L H H Q P Q S H H - - - - - - E P V L F A G T A A A A L G F D G G Y G W S E H Q H Q N H H S E E Q
 
AT3G15030.1     R L V A W N S G G G G G A T D T G N G G G F L F A P P T P S T T S F Q P V L G Q S Q Q L Y S Q R G P L Q S S Y S P M I R
gm033704_Glyma1    R L L Y - - A G G - - - - - N S G H G G G F V F N T P A P V - - - - - P A F G - - - Q F F S Q R G P L Q S S N T P S I R
 
AT3G15030.1     A W F D P - - - H H H H Q S I S T D D L N H H H H L P P P V H Q S A I P - G I G F A S G E F S S G F R I P A R F Q G Q E
gm033704_Glyma1    A W I D P S V D H H H H - - - - - - - - - H H H Y L S Q L I H Q G S V A G G S G F S S G - - F S G F R I P A R I Q G - -
 
AT3G15030.1     E E Q H D G L T H K P S S A S S I S R H
gm033704_Glyma1    E E E H D G V S D K P S S A S S D S R H
 
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