fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15170.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp028835 not found in 424aa AT5G53950.1 1st_not 0.452554744 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G15170.1     MDVDVFNGWGR-PRFED-----ESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQ
pp028835_Pp1s28 ----MAAPWHQEPQGKDQSQRVESFLPPGFRFHPTDEELVSYYLTKKVLDSRFAVRAIAE
                    :   * : *: :*     **::*************::*** ******.*:  **::

AT3G15170.1     VDLNKSEPWELPEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSK
pp028835_Pp1s28 VDLNKCEPWDLPEKAKMGEKEWYFFSLRDRKYPTGMRTNRATDAGYWKATGKDRDVLAHG
                *****.***:***************:*********:******:***********:: :  

AT3G15170.1     TKSLLGMKKTLVFYKGRAPKGEKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSG
pp028835_Pp1s28 RPRLIGMKKTLVFYMGRAPKGEKTNWIMHEYRLENDGGHPLSPRANKDEWVVCRIFEKSS
                   *:********* ********: *:******:.. .:   . : *****:*::  **.

AT3G15170.1     VVSRETNLISSSSSSAVTGEFSSAGSAIAPIIN------------------TFA-TEHVS
pp028835_Pp1s28 GGKRGFSMSESHMRQGMAYQLEDARSSLPPLMDNESPNPTVIDERTATNCETFVETEQMS
                  .*  .: .*   ..:: ::..* *::.*:::                  **. **::*

AT3G15170.1     CFS------------------NNSAAHTD--------ASFHTFLPAPPP-----------
pp028835_Pp1s28 CYNRVQDFDHKKEMNCVMSWINVQPAGMDMVPQVGGLSSLDNGLPKPYPGNEICEKSMSL
                *:.                  * ..*  *        :*:.. ** * *           

AT3G15170.1     --------------------------SLPPR-QPRHVGDGVAFGQFLDLGSSGQ--IDF-
pp028835_Pp1s28 SRQAGFNQQALMQSANMTTTTGFRVTSLRPKTEP------LSFSEGEDEAQSTQKGCDYV
                                          ** *: :*      ::*.:  * ..* *   *: 

AT3G15170.1     ----DAAAAAFFPN-------------------LPSLPPT-----------------VLP
pp028835_Pp1s28 NWPADLAGASLYQNDGTEGDSSSPLQSSTGGTDLSCLTGSLCSGENMSFDFKYRLQDITA
                    * *.*::: *                   *..*. :                 : .

AT3G15170.1     PPPSFAMYGGGSPAVSVWPFTL
pp028835_Pp1s28 PVDS-----GHGPEIIGWA---
                *  *     * .* :  *.
BoxShade v3.31 C (beta, 970507) Output
AT3G15170.1     M D V D V F N G W G R - P R F E D - - - - - E S L M P P G F R F H P T D E E L I T Y Y L L K K V L D S N F S C A A I S Q
pp028835_Pp1s28    - - - - M A A P W H Q E P Q G K D Q S Q R V E S F L P P G F R F H P T D E E L V S Y Y L T K K V L D S R F A V R A I A E
 
AT3G15170.1     V D L N K S E P W E L P E K A K M G E K E W Y F F T L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I K S S K
pp028835_Pp1s28    V D L N K C E P W D L P E K A K M G E K E W Y F F S L R D R K Y P T G M R T N R A T D A G Y W K A T G K D R D V L A H G
 
AT3G15170.1     T K S L L G M K K T L V F Y K G R A P K G E K S C W V M H E Y R L D G K F S Y H Y I S S S A K D E W V L C K V C L K S G
pp028835_Pp1s28    R P R L I G M K K T L V F Y M G R A P K G E K T N W I M H E Y R L E N D G G H P L S P R A N K D E W V V C R I F E K S S
 
AT3G15170.1     V V S R E T N L I S S S S S S A V T G E F S S A G S A I A P I I N - - - - - - - - - - - - - - - - - - T F A - T E H V S
pp028835_Pp1s28    G G K R G F S M S E S H M R Q G M A Y Q L E D A R S S L P P L M D N E S P N P T V I D E R T A T N C E T F V E T E Q M S
 
AT3G15170.1     C F S - - - - - - - - - - - - - - - - - - N N S A A H T D - - - - - - - - A S F H T F L P A P P P - - - - - - - - - - -
pp028835_Pp1s28    C Y N R V Q D F D H K K E M N C V M S W I N V Q P A G M D M V P Q V G G L S S L D N G L P K P Y P G N E I C E K S M S L
 
AT3G15170.1     - - - - - - - - - - - - - - - - - - - - - - - - - - S L P P R - Q P R H V G D G V A F G Q F L D L G S S G Q - - I D F -
pp028835_Pp1s28    S R Q A G F N Q Q A L M Q S A N M T T T T G F R V T S L R P K T E P - - - - - - L S F S E G E D E A Q S T Q K G C D Y V
 
AT3G15170.1     - - - - D A A A A A F F P N - - - - - - - - - - - - - - - - - - - L P S L P P T - - - - - - - - - - - - - - - - - V L P
pp028835_Pp1s28    N W P A D L A G A S L Y Q N D G T E G D S S S P L Q S S T G G T D L S C L T G S L C S G E N M S F D F K Y R L Q D I T A
 
AT3G15170.1     P P P S F A M Y G G G S P A V S V W P F T L
pp028835_Pp1s28    P V D S - - - - - G H G P E I I G W A - - -
 
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