fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15170.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025992 not found in 358aa AT5G53950.1 1st_not 0.510948905 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G15170.1     MDVDVFNGWGRPRFED-ESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNK
pt025992_POPTR_ --MESYH-----HFDSGDAHLPPGFRFHPTDEELITYYLLKKVLDSNFTGRAIAEVDLNK
                  :: ::     :*:. :: :***************************:  **::*****

AT3G15170.1     SEPWELPEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLL
pt025992_POPTR_ CEPWELPGKAKMGEKEWYFFNLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTGALV
                .****** ************.****************************** **** :*:

AT3G15170.1     GMKKTLVFYKGRAPKGEKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSGVVSRE
pt025992_POPTR_ GMKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRCSKDEWVISRVFQKSC-----
                *********:********* ********:***:***:* .:*****:.:*  **      

AT3G15170.1     TNLISSSSSSA-----------VTGEFSSAGS-AIAPIINTFAT----------------
pt025992_POPTR_ SGAASGGSGSAPKKNRFNTTINLYTEASSPSSVSLPPLLDATTTLTTAASTTTLNDRDSC
                :.  *..*.**           :  * **..* ::.*:::: :*                

AT3G15170.1     --------EHVSCFSNNSAAHTDASFHT-----FLPAPPPSLP---PRQPRHVGDGVAFG
pt025992_POPTR_ SYDSHTQHEHVSCFSTIAAAASAAAKHNSNNFDLAPLPPPPMTDSFSRFPRNTGAN-GFP
                        *******. :** : *: *.     : * ***.:.   .* **:.* . .* 

AT3G15170.1     QFLDLGSSGQIDFDAAAAAFFPNLPSLPPTVLPPPPSFAMYGGGSPA-------------
pt025992_POPTR_ SLRSLQENLQLPF------FF----SSPPSAAPVPP---FHGGGAAMNWMVNPEEGRFDG
                .: .* .. *: *      **    * **:. * **   ::***:.              

AT3G15170.1     ----------VSVWPFTL------
pt025992_POPTR_ TGAGIGAGGRVAMGPTELDCMWTY
                          *:: *  *
BoxShade v3.31 C (beta, 970507) Output
AT3G15170.1     M D V D V F N G W G R P R F E D - E S L M P P G F R F H P T D E E L I T Y Y L L K K V L D S N F S C A A I S Q V D L N K
pt025992_POPTR_    - - M E S Y H - - - - - H F D S G D A H L P P G F R F H P T D E E L I T Y Y L L K K V L D S N F T G R A I A E V D L N K
 
AT3G15170.1     S E P W E L P E K A K M G E K E W Y F F T L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I K S S K T K S L L
pt025992_POPTR_    C E P W E L P G K A K M G E K E W Y F F N L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I Y S S K T G A L V
 
AT3G15170.1     G M K K T L V F Y K G R A P K G E K S C W V M H E Y R L D G K F S Y H Y I S S S A K D E W V L C K V C L K S G V V S R E
pt025992_POPTR_    G M K K T L V F Y R G R A P K G E K S N W V M H E Y R L E G K F A Y H Y L S R C S K D E W V I S R V F Q K S C - - - - -
 
AT3G15170.1     T N L I S S S S S S A - - - - - - - - - - - V T G E F S S A G S - A I A P I I N T F A T - - - - - - - - - - - - - - - -
pt025992_POPTR_    S G A A S G G S G S A P K K N R F N T T I N L Y T E A S S P S S V S L P P L L D A T T T L T T A A S T T T L N D R D S C
 
AT3G15170.1     - - - - - - - - E H V S C F S N N S A A H T D A S F H T - - - - - F L P A P P P S L P - - - P R Q P R H V G D G V A F G
pt025992_POPTR_    S Y D S H T Q H E H V S C F S T I A A A A S A A A K H N S N N F D L A P L P P P P M T D S F S R F P R N T G A N - G F P
 
AT3G15170.1     Q F L D L G S S G Q I D F D A A A A A F F P N L P S L P P T V L P P P P S F A M Y G G G S P A - - - - - - - - - - - - -
pt025992_POPTR_    S L R S L Q E N L Q L P F - - - - - - F F - - - - S S P P S A A P V P P - - - F H G G G A A M N W M V N P E E G R F D G
 
AT3G15170.1     - - - - - - - - - - V S V W P F T L - - - - - -
pt025992_POPTR_    T G A G I G A G G R V A M G P T E L D C M W T Y
 
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