fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15170.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031540 RAIAEIDLNKCEPWELPD in 100/526 AT5G53950.1 1st_not 0.479927007 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G15170.1     --------------------MDVDVFNGWGRPRFEDESL---------------------
Sb031540_Sorbi1 LHPQNRRASLHYSHSTAAAVPREEQLRSAGRPETETTTMERFGVLGTRLGLDGVGIGGGG
                                       : :.. ***. *  ::                     

AT3G15170.1     ----MPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKE
Sb031540_Sorbi1 GGGELPPGFRFHPTDEELITYYLLRKAVDGSFCGRAIAEIDLNKCEPWELPDKAKMGEKE
                    :*******************:*.:*..*.  **:::****.******:********

AT3G15170.1     WYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKG
Sb031540_Sorbi1 WYFYSLRDRKYPTGLRTNRATVAGYWKATGKDREIRSGRSGALVGMKKTLVFYRGRAPKG
                ***::**************** *************:*.:: :*:*********:******

AT3G15170.1     EKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSGVV---------------SRET
Sb031540_Sorbi1 HKTHWVMHEFRLDGTYAYHFLPTSTRDEWVIARVFQKPGEVPPARKQHHRLGGLSSAGES
                .*: *****:****.::**::.:*::****:.:*  *.* *               : *:

AT3G15170.1     NLISSSSSSAVTGEFSSAGSAIAPI-INTFATEHVSCFSNNSAAHTDASFHTFLPAPPPS
Sb031540_Sorbi1 CFSDSTSASIGGGGGASASSAPRPLPLTVTDASSLSLFAANAAADGDTSSYC--------
                 : .*:*:*   *  :**.**  *: :..  :. :* *: *:**. *:* :         

AT3G15170.1     LPPRQPRHVGDGVAFGQFLDLG----------SSGQIDFDAAA-----------------
Sb031540_Sorbi1 -----GGHGGGAANTGNKLVTGRELVPCFSTSTTTGAALDAAALGIGQPYNAAVPPPLAF
                       * *...  *: *  *          ::    :****                 

AT3G15170.1     -------AAFFPNLPS---LPPTVLPPPPSFAMYGG-------GSPAVSVWPFTL-----
Sb031540_Sorbi1 EAPPLPTPAFFPNLRSSLQVQDNHLQLPLFLSAGGGGGLSGTLGGGALHHWPFAGMEVKV
                       .****** *   :  . *  *  ::  **       *. *:  ***:      

AT3G15170.1     ------------------------
Sb031540_Sorbi1 EGRSAPPQMAVGPGQLDGAFGWGF
BoxShade v3.31 C (beta, 970507) Output
AT3G15170.1     - - - - - - - - - - - - - - - - - - - - M D V D V F N G W G R P R F E D E S L - - - - - - - - - - - - - - - - - - - - -
Sb031540_Sorbi1    L H P Q N R R A S L H Y S H S T A A A V P R E E Q L R S A G R P E T E T T T M E R F G V L G T R L G L D G V G I G G G G
 
AT3G15170.1     - - - - M P P G F R F H P T D E E L I T Y Y L L K K V L D S N F S C A A I S Q V D L N K S E P W E L P E K A K M G E K E
Sb031540_Sorbi1    G G G E L P P G F R F H P T D E E L I T Y Y L L R K A V D G S F C G R A I A E I D L N K C E P W E L P D K A K M G E K E
 
AT3G15170.1     W Y F F T L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I K S S K T K S L L G M K K T L V F Y K G R A P K G
Sb031540_Sorbi1    W Y F Y S L R D R K Y P T G L R T N R A T V A G Y W K A T G K D R E I R S G R S G A L V G M K K T L V F Y R G R A P K G
 
AT3G15170.1     E K S C W V M H E Y R L D G K F S Y H Y I S S S A K D E W V L C K V C L K S G V V - - - - - - - - - - - - - - - S R E T
Sb031540_Sorbi1    H K T H W V M H E F R L D G T Y A Y H F L P T S T R D E W V I A R V F Q K P G E V P P A R K Q H H R L G G L S S A G E S
 
AT3G15170.1     N L I S S S S S S A V T G E F S S A G S A I A P I - I N T F A T E H V S C F S N N S A A H T D A S F H T F L P A P P P S
Sb031540_Sorbi1    C F S D S T S A S I G G G G G A S A S S A P R P L P L T V T D A S S L S L F A A N A A A D G D T S S Y C - - - - - - - -
 
AT3G15170.1     L P P R Q P R H V G D G V A F G Q F L D L G - - - - - - - - - - S S G Q I D F D A A A - - - - - - - - - - - - - - - - -
Sb031540_Sorbi1    - - - - - G G H G G G A A N T G N K L V T G R E L V P C F S T S T T T G A A L D A A A L G I G Q P Y N A A V P P P L A F
 
AT3G15170.1     - - - - - - - A A F F P N L P S - - - L P P T V L P P P P S F A M Y G G - - - - - - - G S P A V S V W P F T L - - - - -
Sb031540_Sorbi1    E A P P L P T P A F F P N L R S S L Q V Q D N H L Q L P L F L S A G G G G G L S G T L G G G A L H H W P F A G M E V K V
 
AT3G15170.1     - - - - - - - - - - - - - - - - - - - - - - - -
Sb031540_Sorbi1    E G R S A P P Q M A V G P G Q L D G A F G W G F
 
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