fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15170.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037407 not found in 352aa AT5G53950.1 1st_not 0.531021897 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G15170.1     MDVDVFNGWGRPRFEDESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKS
gm037407_Glyma1 MDNSSYHHLD----HTEAHLPPGFRFHPTDEELITYYLLKKVLDSTFTGRAIAEVDLNKS
                ** . ::  .    . *: :*************************.*:  **::******

AT3G15170.1     EPWELPEKAKMGEKEWYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLG
gm037407_Glyma1 EPWELPEKAKMGEKEWYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIYSSKTCSLVG
                *******************:****************************** **** **:*

AT3G15170.1     MKKTLVFYKGRAPKGEKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSGVVSRET
gm037407_Glyma1 MKKTLVFYRGRAPKGEKSNWVMHEYRLEGKFAYHYLSRNSKDEWVISRVFQKSNTATNNG
                ********:********* ********:***:***:* .:*****:.:*  **...:.: 

AT3G15170.1     NLISSSSSSAVTGEFSSAGSAI-----------------APIINT--------------F
gm037407_Glyma1 GSVMSASSNSKKTRMNSTTSLIHEPSSPSSVFLPPLLDTSPYTNTANFTDRHNGSYDSIT
                . : *:**.: . .:.*: * *                 :*  **               

AT3G15170.1     ATEHVSCFSNNSAAHT---------DASFHTFLPAPPPSLPPRQPRHVGDGVAFGQFLDL
gm037407_Glyma1 KKEHVSCFSTIAAATTAVVSPNNFNNAGF---------DLSPSQPLATD---PFARF---
                 .*******. :** *         :*.*         .*.* **  ..   .*.:*   

AT3G15170.1     GSSGQIDFDAAAAAFFPNLPSLPPTVLPP------PPSFAMYGGGSPAVSVWPFTL----
gm037407_Glyma1 --QRNVDFSA-----FPSLRSLQDNLQFPFVFSTAAPPFS--GGGSGDFLSWPVPEEQRL
                  . ::**.*     **.* **  .:  *      .*.*:  ****  .  **..     

AT3G15170.1     --------------------
gm037407_Glyma1 IDGVSNMPLGVSELDCMWSY
BoxShade v3.31 C (beta, 970507) Output
AT3G15170.1     M D V D V F N G W G R P R F E D E S L M P P G F R F H P T D E E L I T Y Y L L K K V L D S N F S C A A I S Q V D L N K S
gm037407_Glyma1    M D N S S Y H H L D - - - - H T E A H L P P G F R F H P T D E E L I T Y Y L L K K V L D S T F T G R A I A E V D L N K S
 
AT3G15170.1     E P W E L P E K A K M G E K E W Y F F T L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I K S S K T K S L L G
gm037407_Glyma1    E P W E L P E K A K M G E K E W Y F F S L R D R K Y P T G L R T N R A T E A G Y W K A T G K D R E I Y S S K T C S L V G
 
AT3G15170.1     M K K T L V F Y K G R A P K G E K S C W V M H E Y R L D G K F S Y H Y I S S S A K D E W V L C K V C L K S G V V S R E T
gm037407_Glyma1    M K K T L V F Y R G R A P K G E K S N W V M H E Y R L E G K F A Y H Y L S R N S K D E W V I S R V F Q K S N T A T N N G
 
AT3G15170.1     N L I S S S S S S A V T G E F S S A G S A I - - - - - - - - - - - - - - - - - A P I I N T - - - - - - - - - - - - - - F
gm037407_Glyma1    G S V M S A S S N S K K T R M N S T T S L I H E P S S P S S V F L P P L L D T S P Y T N T A N F T D R H N G S Y D S I T
 
AT3G15170.1     A T E H V S C F S N N S A A H T - - - - - - - - - D A S F H T F L P A P P P S L P P R Q P R H V G D G V A F G Q F L D L
gm037407_Glyma1    K K E H V S C F S T I A A A T T A V V S P N N F N N A G F - - - - - - - - - D L S P S Q P L A T D - - - P F A R F - - -
 
AT3G15170.1     G S S G Q I D F D A A A A A F F P N L P S L P P T V L P P - - - - - - P P S F A M Y G G G S P A V S V W P F T L - - - -
gm037407_Glyma1    - - Q R N V D F S A - - - - - F P S L R S L Q D N L Q F P F V F S T A A P P F S - - G G G S G D F L S W P V P E E Q R L
 
AT3G15170.1     - - - - - - - - - - - - - - - - - - - -
gm037407_Glyma1    I D G V S N M P L G V S E L D C M W S Y
 
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