fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15210.1 GNVPPQLELSLGGGGG at 125/222 in AT3G15210.1
KRSQLLDLDLNLPPPSEQ at 208/222 in AT3G15210.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os004257 MPLPPTLDLDLFHRAA in 128/235 AT3G15210.1 1st_1st 0.262569832 Ib
NKAAAFDLDLNRPPPVEN in 223/235
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G15210.1     MAKMGLKPDPATTNQTH--------------NNAKEIRYRGVRKRPWGRYAAEIRDPGKK
Os004257_Os01t0 -----MAPRAATVEKVAVAPPTGLGLGVGGGVGAGGPHYRGVRKRPWGRYAAEIRDPAKK
                     : * .**.::.                .*   :*******************.**

AT3G15210.1     TRVWLGTFDTAEEAARAYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLD
Os004257_Os01t0 SRVWLGTYDTAEEAARAYDAAAREFRGAKAKTNFP----FASQSM-VGCGGSPSSNSTVD
                :******:***********:***:***********    ::.*.: .* . ***..**:*

AT3G15210.1     CA----SPPTLVVPSATAGNVPPQLELSL----------GGGG-----GGSCYQIPMSRP
Os004257_Os01t0 TGGGGVQTPMRAMP------LPPTLDLDLFHRAAAVTAVAGTGVRFPFRGYPVARPATHP
                 .    ..*  .:*      :** *:*.*          .* *      *     * ::*

AT3G15210.1     VYFLDLMGIGNVGRGQ------PPPVTSAFRSPVVHVATKMACGAQSDSDSSSVVDFEGG
Os004257_Os01t0 YFFYEQAAAAAAAEAGYRMMKLAPPVT-------------VAAVAQSDSDSSSVVDLAPS
                 :* :  . . ....       .****             :*. ************:  .

AT3G15210.1     ----MEKRSQLLDLDLNLPPPSEQA
Os004257_Os01t0 PPAVTANKAAAFDLDLNRPPPVEN-
                      :::  :***** *** *:
BoxShade v3.31 C (beta, 970507) Output
AT3G15210.1     M A K M G L K P D P A T T N Q T H - - - - - - - - - - - - - - N N A K E I R Y R G V R K R P W G R Y A A E I R D P G K K
Os004257_Os01t0    - - - - - M A P R A A T V E K V A V A P P T G L G L G V G G G V G A G G P H Y R G V R K R P W G R Y A A E I R D P A K K
 
AT3G15210.1     T R V W L G T F D T A E E A A R A Y D T A A R D F R G A K A K T N F P T F L E L S D Q K V P T G F A R S P S Q S S T L D
Os004257_Os01t0    S R V W L G T Y D T A E E A A R A Y D A A A R E F R G A K A K T N F P - - - - F A S Q S M - V G C G G S P S S N S T V D
 
AT3G15210.1     C A - - - - S P P T L V V P S A T A G N V P P Q L E L S L - - - - - - - - - - G G G G - - - - - G G S C Y Q I P M S R P
Os004257_Os01t0    T G G G G V Q T P M R A M P - - - - - - L P P T L D L D L F H R A A A V T A V A G T G V R F P F R G Y P V A R P A T H P
 
AT3G15210.1     V Y F L D L M G I G N V G R G Q - - - - - - P P P V T S A F R S P V V H V A T K M A C G A Q S D S D S S S V V D F E G G
Os004257_Os01t0    Y F F Y E Q A A A A A A A E A G Y R M M K L A P P V T - - - - - - - - - - - - - V A A V A Q S D S D S S S V V D L A P S
 
AT3G15210.1     - - - - M E K R S Q L L D L D L N L P P P S E Q A
Os004257_Os01t0    P P A V T A N K A A A F D L D L N R P P P V E N -
 
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