Input
| Putative repression domain
|
|
AT3G15210.1 |
GNVPPQLELSLGGGGG at 125/222 in AT3G15210.1 |
|
KRSQLLDLDLNLPPPSEQ at 208/222 in AT3G15210.1 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm034499 |
NRRVLLDLDLNVPPLPEV in 180/193 |
AT3G15210.1 |
1st_1st |
0.354748603 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT3G15210.1 ----------MAKMGLKPDPATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVW
gm034499_Glyma1 MAPRDSRATAFAGPGPGPSPA--------HKEIRYRGVRKRPWGRYAAEIRDPGKKTRVW
:* * *.** ******************************
AT3G15210.1 LGTFDTAEEAARAYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLDCASP
gm034499_Glyma1 LGTFDTAEEAARAYDTAAREFRGAKAKTNFPTPSEL----ILNNNIRSPSQSSTLDSSSP
*******************:************ ** : .. **********.:**
AT3G15210.1 PTLVVPSATAGNVPPQLELSLGGGGGGSCYQI-----PMSRPVYFLDLMGIGNVGRGQPP
gm034499_Glyma1 PS---P-------PPPLDLTL------TPLSVAVTVFPVARPVLFFDAF-----------
*: * ** *:*:* : .: *::*** *:* :
AT3G15210.1 PVTSAFRSPVVHVATKMACGAQ--------SDSDSSSVVDFEGGMEKRSQLLDLDLNLPP
gm034499_Glyma1 ----ARADAMIAVSRREMCGFERPAADFRRNDSDS----DY-----NRRVLLDLDLNVPP
* ..:: *: : ** : .**** *: :* *******:**
AT3G15210.1 PSEQA
gm034499_Glyma1 LPEVA
.* *
BoxShade v3.31 C (beta, 970507) Output
AT3G15210.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
A |
K |
M |
G |
L |
K |
P |
D |
P |
A |
T |
T |
N |
Q |
T |
H |
N |
N |
A |
K |
E |
I |
R |
Y |
R |
G |
V |
R |
K |
R |
P |
W |
G |
R |
Y |
A |
A |
E |
I |
R |
D |
P |
G |
K |
K |
T |
R |
V |
W |
gm034499_Glyma1 |
M |
A |
P |
R |
D |
S |
R |
A |
T |
A |
F |
A |
G |
P |
G |
P |
G |
P |
S |
P |
A |
- |
- |
- |
- |
- |
- |
- |
- |
H |
K |
E |
I |
R |
Y |
R |
G |
V |
R |
K |
R |
P |
W |
G |
R |
Y |
A |
A |
E |
I |
R |
D |
P |
G |
K |
K |
T |
R |
V |
W |
|
AT3G15210.1 |
L |
G |
T |
F |
D |
T |
A |
E |
E |
A |
A |
R |
A |
Y |
D |
T |
A |
A |
R |
D |
F |
R |
G |
A |
K |
A |
K |
T |
N |
F |
P |
T |
F |
L |
E |
L |
S |
D |
Q |
K |
V |
P |
T |
G |
F |
A |
R |
S |
P |
S |
Q |
S |
S |
T |
L |
D |
C |
A |
S |
P |
gm034499_Glyma1 |
L |
G |
T |
F |
D |
T |
A |
E |
E |
A |
A |
R |
A |
Y |
D |
T |
A |
A |
R |
E |
F |
R |
G |
A |
K |
A |
K |
T |
N |
F |
P |
T |
P |
S |
E |
L |
- |
- |
- |
- |
I |
L |
N |
N |
N |
I |
R |
S |
P |
S |
Q |
S |
S |
T |
L |
D |
S |
S |
S |
P |
|
AT3G15210.1 |
P |
T |
L |
V |
V |
P |
S |
A |
T |
A |
G |
N |
V |
P |
P |
Q |
L |
E |
L |
S |
L |
G |
G |
G |
G |
G |
G |
S |
C |
Y |
Q |
I |
- |
- |
- |
- |
- |
P |
M |
S |
R |
P |
V |
Y |
F |
L |
D |
L |
M |
G |
I |
G |
N |
V |
G |
R |
G |
Q |
P |
P |
gm034499_Glyma1 |
P |
S |
- |
- |
- |
P |
- |
- |
- |
- |
- |
- |
- |
P |
P |
P |
L |
D |
L |
T |
L |
- |
- |
- |
- |
- |
- |
T |
P |
L |
S |
V |
A |
V |
T |
V |
F |
P |
V |
A |
R |
P |
V |
L |
F |
F |
D |
A |
F |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT3G15210.1 |
P |
V |
T |
S |
A |
F |
R |
S |
P |
V |
V |
H |
V |
A |
T |
K |
M |
A |
C |
G |
A |
Q |
- |
- |
- |
- |
- |
- |
- |
- |
S |
D |
S |
D |
S |
S |
S |
V |
V |
D |
F |
E |
G |
G |
M |
E |
K |
R |
S |
Q |
L |
L |
D |
L |
D |
L |
N |
L |
P |
P |
gm034499_Glyma1 |
- |
- |
- |
- |
A |
R |
A |
D |
A |
M |
I |
A |
V |
S |
R |
R |
E |
M |
C |
G |
F |
E |
R |
P |
A |
A |
D |
F |
R |
R |
N |
D |
S |
D |
S |
- |
- |
- |
- |
D |
Y |
- |
- |
- |
- |
- |
N |
R |
R |
V |
L |
L |
D |
L |
D |
L |
N |
V |
P |
P |
|
AT3G15210.1 |
P |
S |
E |
Q |
A |
gm034499_Glyma1 |
L |
P |
E |
V |
A |
|
|