fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15210.1 GNVPPQLELSLGGGGG at 125/222 in AT3G15210.1
KRSQLLDLDLNLPPPSEQ at 208/222 in AT3G15210.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034499 NRRVLLDLDLNVPPLPEV in 180/193 AT3G15210.1 1st_1st 0.354748603 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G15210.1     ----------MAKMGLKPDPATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVW
gm034499_Glyma1 MAPRDSRATAFAGPGPGPSPA--------HKEIRYRGVRKRPWGRYAAEIRDPGKKTRVW
                          :*  *  *.**         ******************************

AT3G15210.1     LGTFDTAEEAARAYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLDCASP
gm034499_Glyma1 LGTFDTAEEAARAYDTAAREFRGAKAKTNFPTPSEL----ILNNNIRSPSQSSTLDSSSP
                *******************:************  **    : ..  **********.:**

AT3G15210.1     PTLVVPSATAGNVPPQLELSLGGGGGGSCYQI-----PMSRPVYFLDLMGIGNVGRGQPP
gm034499_Glyma1 PS---P-------PPPLDLTL------TPLSVAVTVFPVARPVLFFDAF-----------
                *:   *       ** *:*:*      :  .:     *::*** *:* :           

AT3G15210.1     PVTSAFRSPVVHVATKMACGAQ--------SDSDSSSVVDFEGGMEKRSQLLDLDLNLPP
gm034499_Glyma1 ----ARADAMIAVSRREMCGFERPAADFRRNDSDS----DY-----NRRVLLDLDLNVPP
                    *  ..:: *: :  ** :        .****    *:     :*  *******:**

AT3G15210.1     PSEQA
gm034499_Glyma1 LPEVA
                 .* *
BoxShade v3.31 C (beta, 970507) Output
AT3G15210.1     - - - - - - - - - - M A K M G L K P D P A T T N Q T H N N A K E I R Y R G V R K R P W G R Y A A E I R D P G K K T R V W
gm034499_Glyma1    M A P R D S R A T A F A G P G P G P S P A - - - - - - - - H K E I R Y R G V R K R P W G R Y A A E I R D P G K K T R V W
 
AT3G15210.1     L G T F D T A E E A A R A Y D T A A R D F R G A K A K T N F P T F L E L S D Q K V P T G F A R S P S Q S S T L D C A S P
gm034499_Glyma1    L G T F D T A E E A A R A Y D T A A R E F R G A K A K T N F P T P S E L - - - - I L N N N I R S P S Q S S T L D S S S P
 
AT3G15210.1     P T L V V P S A T A G N V P P Q L E L S L G G G G G G S C Y Q I - - - - - P M S R P V Y F L D L M G I G N V G R G Q P P
gm034499_Glyma1    P S - - - P - - - - - - - P P P L D L T L - - - - - - T P L S V A V T V F P V A R P V L F F D A F - - - - - - - - - - -
 
AT3G15210.1     P V T S A F R S P V V H V A T K M A C G A Q - - - - - - - - S D S D S S S V V D F E G G M E K R S Q L L D L D L N L P P
gm034499_Glyma1    - - - - A R A D A M I A V S R R E M C G F E R P A A D F R R N D S D S - - - - D Y - - - - - N R R V L L D L D L N V P P
 
AT3G15210.1     P S E Q A
gm034499_Glyma1    L P E V A
 
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