fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025879 not found in 193aa AT3G15270.1 1st_1st 0.508771929 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G15270.1     -----MEGQRTQRRGYLKDKATVSN--LVEEEMENGMDGEEEDGG-----DEDKRKKVME
pt025879_POPTR_ MDAKTLEG----KRNYLKEKMINKDDFPIEDDLEDDMEEDEGGGGCFGFTDDEKKKGVGK
                     :**    :*.***:*   .:   :*:::*:.*: :* .**     *::*:* * :

AT3G15270.1     RVRGPSTDRVPSRLCQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCS
pt025879_POPTR_ RGTGGGGASPPS--CQVEKCGANLTDAKRYHRRHKVCEVHAKSPAVVVAGLRQRFCQQCS
                *  * .    **  ***::* .***:**:*:***:*******:.*..***:*********

AT3G15270.1     RFHELPEFDEAKRSCRRRLAGHNERRRKISGDSFGEGSGRRGFSGQLI-----QTQERNR
pt025879_POPTR_ RFHELLEFDETKRSCRRRLAGHNERRRKNTAESYGEGSSRKGVGTQLKESPCRQADERGR
                ***** ****:***************** :.:*:****.*:*.. **      *::**.*

AT3G15270.1     VDRKLP-MTNSSFKRPQIR
pt025879_POPTR_ YQMSIPSQGSSSYKRSQIR
                 : .:*   .**:**.***
BoxShade v3.31 C (beta, 970507) Output
AT3G15270.1     - - - - - M E G Q R T Q R R G Y L K D K A T V S N - - L V E E E M E N G M D G E E E D G G - - - - - D E D K R K K V M E
pt025879_POPTR_    M D A K T L E G - - - - K R N Y L K E K M I N K D D F P I E D D L E D D M E E D E G G G G C F G F T D D E K K K G V G K
 
AT3G15270.1     R V R G P S T D R V P S R L C Q V D R C T V N L T E A K Q Y Y R R H R V C E V H A K A S A A T V A G V R Q R F C Q Q C S
pt025879_POPTR_    R G T G G G G A S P P S - - C Q V E K C G A N L T D A K R Y H R R H K V C E V H A K S P A V V V A G L R Q R F C Q Q C S
 
AT3G15270.1     R F H E L P E F D E A K R S C R R R L A G H N E R R R K I S G D S F G E G S G R R G F S G Q L I - - - - - Q T Q E R N R
pt025879_POPTR_    R F H E L L E F D E T K R S C R R R L A G H N E R R R K N T A E S Y G E G S S R K G V G T Q L K E S P C R Q A D E R G R
 
AT3G15270.1     V D R K L P - M T N S S F K R P Q I R
pt025879_POPTR_    Y Q M S I P S Q G S S S Y K R S Q I R
 
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