fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt036762 not found in 202aa AT3G15270.1 not_1st 0.470175438 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G15270.1     MEGQRTQRRGYL------KDKATVSNLVEEEMENGMDGEEEDGGDEDKRKKVMERVRGPS
pt036762_POPTR_ MDGKGKQIRMVMGREVMKKDSADDSSDDEGYEQNQMGFMEDEFFESNKKKKVVVTAAAAA
                *:*: .* *  :      **.*  *.  *   :* *.  *::  :.:*:***:  . ..:

AT3G15270.1     TD--RVPS------RLCQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQ
pt036762_POPTR_ GGGRRVSSGGGGGMRCCQVEKCTANLTDAKQYHRRHKVCGHHAKAQVVLVAGIRQRFCQQ
                 .  **.*      * ***::**.***:****:***:**  ****... ***:*******

AT3G15270.1     CSRFHELPEFDEAKRSCRRRLAGHNERRRKISGDSFGEGSGRR--GFSGQLI------QT
pt036762_POPTR_ CSRFHELSEFDETKRSCRRRLAGHNERRRKNVVESHVEGSSRKVNGTHGTQLKDMVCGQA
                *******.****:*****************   :*. ***.*:  *  *  :      *:

AT3G15270.1     QERNRVDRKLPMTNSSFKRPQIR
pt036762_POPTR_ DERGRIKITI-QENATYKHFQIS
                :**.*:. .:   *:::*: **
BoxShade v3.31 C (beta, 970507) Output
AT3G15270.1     M E G Q R T Q R R G Y L - - - - - - K D K A T V S N L V E E E M E N G M D G E E E D G G D E D K R K K V M E R V R G P S
pt036762_POPTR_    M D G K G K Q I R M V M G R E V M K K D S A D D S S D D E G Y E Q N Q M G F M E D E F F E S N K K K K V V V T A A A A A
 
AT3G15270.1     T D - - R V P S - - - - - - R L C Q V D R C T V N L T E A K Q Y Y R R H R V C E V H A K A S A A T V A G V R Q R F C Q Q
pt036762_POPTR_    G G G R R V S S G G G G G M R C C Q V E K C T A N L T D A K Q Y H R R H K V C G H H A K A Q V V L V A G I R Q R F C Q Q
 
AT3G15270.1     C S R F H E L P E F D E A K R S C R R R L A G H N E R R R K I S G D S F G E G S G R R - - G F S G Q L I - - - - - - Q T
pt036762_POPTR_    C S R F H E L S E F D E T K R S C R R R L A G H N E R R R K N V V E S H V E G S S R K V N G T H G T Q L K D M V C G Q A
 
AT3G15270.1     Q E R N R V D R K L P M T N S S F K R P Q I R
pt036762_POPTR_    D E R G R I K I T I - Q E N A T Y K H F Q I S
 
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