fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb014399 not found in 418aa AT1G27370.4 1st_not 0.435087719 II
Sb006468 RGTAPELQLHLASSRP in 7/247 AT3G15270.1 not_1st 0.410526315 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G15270.1     MEG---------------------------------------------------------
Sb014399_Sorbi1 MEGNGGAGGGSGSAAPPWDLAMHWAPSAGSSYPQQPLALRPGGVPSSQLQLLHQQQQQQQ
Sb006468_Sorbi1 MRG----------TAP--ELQLHLASSRPA--PRSPR-------PVSSLAGATMDRKS--
                *.*                                                         

AT3G15270.1     ------QRTQRRGYLKDKATVSNLV----------EEEMENGMDGEEEDGGD--------
Sb014399_Sorbi1 QELTCLKLGKRPACCWAGAALGSQVVAAQAGAG---------LPHHLHGNG---------
Sb006468_Sorbi1 ------KSTKGSAASSAAASMAALAAAAAAGDSSADPGAEDNVPAKMAAVGDVSSSSPVA
                      :  :  .     *::.  .                 :  .    *         

AT3G15270.1     -------------------EDKRKKVMERVRGP-----STDRVPSRLCQVDRCTVNL-TE
Sb014399_Sorbi1 ---GGAAAGCGGGASGKAAEGKRKEKQAAAAAP-----GAAAVPR--CQVEGCHVAL-AD
Sb006468_Sorbi1 ARRSVAAAGGAASSSSPVPAAARRGAAAAAAASVAAGGGGGGGPR--CQAERCNANLMTD
                                      *:     . ..     .    *   **.: * . * ::

AT3G15270.1     AKQYYRRHRVCEVHAKASAATVAGVRQRFCQQCSRFHELPEFDEAKRSCRRRLAGHNERR
Sb014399_Sorbi1 AKDYHRRHKVCEAHSKAPRVVVLGAEQRFCQQCSRFHAISEFDEAKRSCRRRLAGHNERR
Sb006468_Sorbi1 EKPYNRRHKVCEAHSKAPVVLVAGLRQRFCQQCSRFHELSEFDDIKRSCRLRLAGHNERR
                 * * ***:***.*:**. . * * .*********** :.***: ***** *********

AT3G15270.1     RKISGD--------------SFGEG-----SGRRGFSGQ---------------------
Sb014399_Sorbi1 RKSNASEAMARGAAHPHGVTAFGHGFLPPCGGLSGSSAGALSLLSSARSGATSAAPWQVT
Sb006468_Sorbi1 RKSSAD----------------AHG-----GGGAGAGAG---------------------
                ** ...                ..*     .*  * ..                      

AT3G15270.1     ------------------------------------------------------------
Sb014399_Sorbi1 TSDISARSSAALDDLIAENRAALLAWQYFSDRSSSAPGRHFASSSSTATGCALPPADDQH
Sb006468_Sorbi1 ------------------------------------------------------------
                                                                            

AT3G15270.1     -------------------------------LIQTQ------------------------
Sb014399_Sorbi1 AAASWRPHPHSGVGGGRHHMAPPGVWHTTLDLMQTASSAAPATSTGAPFRPVPERAGARP
Sb006468_Sorbi1 -------------NGFRQHA----------------------------------------
                                                                            

AT3G15270.1     --------ERNR--VDRKLPMTNSSFKRPQIR
Sb014399_Sorbi1 RGKSKDGDDASGCSLDAWAPAGGARVL-----
Sb006468_Sorbi1 --------DQNG-------PAGNHFQIR----
                        : .        *  .
BoxShade v3.31 C (beta, 970507) Output
AT3G15270.1     M E G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb014399_Sorbi1    M E G N G G A G G G S G S A A P P W D L A M H W A P S A G S S Y P Q Q P L A L R P G G V P S S Q L Q L L H Q Q Q Q Q Q Q
Sb006468_Sorbi1    M R G - - - - - - - - - - T A P - - E L Q L H L A S S R P A - - P R S P R - - - - - - - P V S S L A G A T M D R K S - -
 
AT3G15270.1     - - - - - - Q R T Q R R G Y L K D K A T V S N L V - - - - - - - - - - E E E M E N G M D G E E E D G G D - - - - - - - -
Sb014399_Sorbi1    Q E L T C L K L G K R P A C C W A G A A L G S Q V V A A Q A G A G - - - - - - - - - L P H H L H G N G - - - - - - - - -
Sb006468_Sorbi1    - - - - - - K S T K G S A A S S A A A S M A A L A A A A A A G D S S A D P G A E D N V P A K M A A V G D V S S S S P V A
 
AT3G15270.1     - - - - - - - - - - - - - - - - - - - E D K R K K V M E R V R G P - - - - - S T D R V P S R L C Q V D R C T V N L - T E
Sb014399_Sorbi1    - - - G G A A A G C G G G A S G K A A E G K R K E K Q A A A A A P - - - - - G A A A V P R - - C Q V E G C H V A L - A D
Sb006468_Sorbi1    A R R S V A A A G G A A S S S S P V P A A A R R G A A A A A A A S V A A G G G G G G G P R - - C Q A E R C N A N L M T D
 
AT3G15270.1     A K Q Y Y R R H R V C E V H A K A S A A T V A G V R Q R F C Q Q C S R F H E L P E F D E A K R S C R R R L A G H N E R R
Sb014399_Sorbi1    A K D Y H R R H K V C E A H S K A P R V V V L G A E Q R F C Q Q C S R F H A I S E F D E A K R S C R R R L A G H N E R R
Sb006468_Sorbi1    E K P Y N R R H K V C E A H S K A P V V L V A G L R Q R F C Q Q C S R F H E L S E F D D I K R S C R L R L A G H N E R R
 
AT3G15270.1     R K I S G D - - - - - - - - - - - - - - S F G E G - - - - - S G R R G F S G Q - - - - - - - - - - - - - - - - - - - - -
Sb014399_Sorbi1    R K S N A S E A M A R G A A H P H G V T A F G H G F L P P C G G L S G S S A G A L S L L S S A R S G A T S A A P W Q V T
Sb006468_Sorbi1    R K S S A D - - - - - - - - - - - - - - - - A H G - - - - - G G G A G A G A G - - - - - - - - - - - - - - - - - - - - -
 
AT3G15270.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb014399_Sorbi1    T S D I S A R S S A A L D D L I A E N R A A L L A W Q Y F S D R S S S A P G R H F A S S S S T A T G C A L P P A D D Q H
Sb006468_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G15270.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L I Q T Q - - - - - - - - - - - - - - - - - - - - - - - -
Sb014399_Sorbi1    A A A S W R P H P H S G V G G G R H H M A P P G V W H T T L D L M Q T A S S A A P A T S T G A P F R P V P E R A G A R P
Sb006468_Sorbi1    - - - - - - - - - - - - - N G F R Q H A - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G15270.1     - - - - - - - - E R N R - - V D R K L P M T N S S F K R P Q I R
Sb014399_Sorbi1    R G K S K D G D D A S G C S L D A W A P A G G A R V L - - - - -
Sb006468_Sorbi1    - - - - - - - - D Q N G - - - - - - - P A G N H F Q I R - - - -
 
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