fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15270.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037008 not found in 138aa AT2G33810.1 1st_not 0.449122807 II
Gm037412 not found in 187aa AT3G15270.1 not_1st 0.435087719 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G15270.1     MEGQRTQ-RRGYLKDKATVSNLVEEEMENGMDGEEED----GGD----EDKRKKV--MER
gm037008_Glyma1 MDGSWSEGKRSMSYKE--ED---EYEEE-----EEEEVSEYGDDG-----KKKRV--VSN
gm037412_Glyma1 MEIKSGE-RRQVSIEKVRRDNTVEVEDE-----EEEDESVVGGEGGLAEDERKKIGGGSG
                *: .  : :*    .:   .   * * *     ***:    *.:      ::*::   . 

AT3G15270.1     VRGPS--TDRVPSRLCQVDRCTVNLTEAKQYYRRHRVCEVHAKASAATVAGVRQRFCQQC
gm037008_Glyma1 KRGSKAGGSVPPS--CQVDGCNADLSEAKPYHRRHKVCEYHAKAPAVVIGDQHQRFCQQC
gm037412_Glyma1 RRGSS--GVSPPS--CQAEICGADLTVAKRYHRRHKVCELHSKAPSVMVAGLRQRFCQQC
                 **..      **  **.: * .:*: ** *:***:*** *:**.:. :.. :*******

AT3G15270.1     SRFHELPEFDEAKRSCRRRLAGHNERRRKISGDSFGEG-SGRRGFSGQLIQTQERNRVD-
gm037008_Glyma1 SRFHELSEFDDSKRSCRRRLAGHNERRRKNASE---------------------------
gm037412_Glyma1 SRFHELAEFDEAKRSCRRRLARHNERRRKSNAETCNEGCSGSKG--QHPAETHCRNTDDW
                ******.***::********* *******  .:                           

AT3G15270.1     RKLPMT---NSSFKRPQIR
gm037008_Glyma1 ---------------YHGL
gm037412_Glyma1 GRIQMNIAKNSGYKFFHIR
                                :
BoxShade v3.31 C (beta, 970507) Output
AT3G15270.1     M E G Q R T Q - R R G Y L K D K A T V S N L V E E E M E N G M D G E E E D - - - - G G D - - - - E D K R K K V - - M E R
gm037008_Glyma1    M D G S W S E G K R S M S Y K E - - E D - - - E Y E E E - - - - - E E E E V S E Y G D D G - - - - - K K K R V - - V S N
gm037412_Glyma1    M E I K S G E - R R Q V S I E K V R R D N T V E V E D E - - - - - E E E D E S V V G G E G G L A E D E R K K I G G G S G
 
AT3G15270.1     V R G P S - - T D R V P S R L C Q V D R C T V N L T E A K Q Y Y R R H R V C E V H A K A S A A T V A G V R Q R F C Q Q C
gm037008_Glyma1    K R G S K A G G S V P P S - - C Q V D G C N A D L S E A K P Y H R R H K V C E Y H A K A P A V V I G D Q H Q R F C Q Q C
gm037412_Glyma1    R R G S S - - G V S P P S - - C Q A E I C G A D L T V A K R Y H R R H K V C E L H S K A P S V M V A G L R Q R F C Q Q C
 
AT3G15270.1     S R F H E L P E F D E A K R S C R R R L A G H N E R R R K I S G D S F G E G - S G R R G F S G Q L I Q T Q E R N R V D -
gm037008_Glyma1    S R F H E L S E F D D S K R S C R R R L A G H N E R R R K N A S E - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm037412_Glyma1    S R F H E L A E F D E A K R S C R R R L A R H N E R R R K S N A E T C N E G C S G S K G - - Q H P A E T H C R N T D D W
 
AT3G15270.1     R K L P M T - - - N S S F K R P Q I R
gm037008_Glyma1    - - - - - - - - - - - - - - - Y H G L
gm037412_Glyma1    G R I Q M N I A K N S G Y K F F H I R
 
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