fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037471 not found in 343aa AT3G15500.1 1st_1st 0.581818181 Ia
Sm014761 not found in 406aa AT3G15500.1 1st_1st 0.433057851 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT3G15500.1     -------------------------------------------MGLQE--LDPLA-----
gm037471_Glyma1 -------------------------------------------MGVPE--KDPLS-----
Sm014761_Selmo1 LIHRCDDHVRSYREEEEGIIHPHASQRDSVKKERRAQSNRLRKLGIPRELIDPISLDRSM
                                                           :*: .   **::     

AT3G15500.1     -------------QLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPW
gm037471_Glyma1 -------------QLSLPPGFRFYPTDEELLVQYLCRKVAGHHFSLPIIAEIDLYKFDPW
Sm014761_Selmo1 DSGGKPRTAPPSEQLNLPAGFRFHPTDEELVVSYLAIKAESRPFAIPIIAEIDLYKFDPW
                             **.**.****:******:*.**. *. .: *:: :************

AT3G15500.1     VLPSKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKAL
gm037471_Glyma1 VLPSKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTEGRKVGIKKAL
Sm014761_Selmo1 ELPEKALFGEREWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKPILSKGKKVGVKKAL
                 **.**:***:***************:****.*.*********** * ::*::**:****

AT3G15500.1     VFYIGKAPKGTKTNWIMHEYRLIEPS----------RRNGSTKLDDWVLCRIYKKQTSAQ
gm037471_Glyma1 VFYVGKAPKGTKTNWIMHEYRLLDSS----------RKNTGTKLDDWVLCRIYKKNSSAQ
Sm014761_Selmo1 VFYKGKAPKGSKTNWIMHEYRLADSSAKAAAAIPAMRKKGSLRLDDWVLCRIYKKSSGAF
                *** ******:*********** :.*          *:: . :************.:.* 

AT3G15500.1     KQAYNNLMTSGR--EYSNNGSSTSSSS-------HQYDDVLESLHEIDNRSL-----GFA
gm037471_Glyma1 KTAQNGVVPSNEHTQYS-NGSSSSSSS--------QLEDVLESLPSIDERC-------FA
Sm014761_Selmo1 KPML--------------SGSTTPRSSMKSEPPEEELDDVLASLPDIDDNSRLYKIPPFG
                *                 .**::. **        : :*** ** .**:..       *.

AT3G15500.1     AGSSNALPHSHRP----VLTNHKTGFQGLAREPSFDWANLIGQNSVPELGLSHN------
gm037471_Glyma1 MPRVNTLQQQQH-------HEEKVNVQNLGAGGLMDWTNPSVLNSVADFASGNNQVVQDQ
Sm014761_Selmo1 SSSPPPPPRRGRAWNSRTRTTSGVRADRPSRGPSRD------------------------
                     .  :  :           .  :  .     *                        

AT3G15500.1     -------------VPSIRYGD------------GGTQQQTEGIPRFNNNSDVSAN---QG
gm037471_Glyma1 TQGMVNYNCNDLYVPTLCHLDSSVPLKMEEEVQSGVRNQRVG----NNNSWFLQNDFTQG
Sm014761_Selmo1 -------------LPTIC------P------------------PR-CSTRDLLAR-----
                             :*::                              ..  .  .     

AT3G15500.1     F--SVDPVNGFGYSGQQSSGF--GFI------
gm037471_Glyma1 FQNSVDTC-GFKYP-VQPVGF--GFRN-----
Sm014761_Selmo1 ---------------RRPSHFLLGERSVENRC
                                :.  *  *
BoxShade v3.31 C (beta, 970507) Output
AT3G15500.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G L Q E - - L D P L A - - - - -
gm037471_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G V P E - - K D P L S - - - - -
Sm014761_Selmo1    L I H R C D D H V R S Y R E E E E G I I H P H A S Q R D S V K K E R R A Q S N R L R K L G I P R E L I D P I S L D R S M
 
AT3G15500.1     - - - - - - - - - - - - - Q L S L P P G F R F Y P T D E E L M V E Y L C R K A A G H D F S L Q L I A E I D L Y K F D P W
gm037471_Glyma1    - - - - - - - - - - - - - Q L S L P P G F R F Y P T D E E L L V Q Y L C R K V A G H H F S L P I I A E I D L Y K F D P W
Sm014761_Selmo1    D S G G K P R T A P P S E Q L N L P A G F R F H P T D E E L V V S Y L A I K A E S R P F A I P I I A E I D L Y K F D P W
 
AT3G15500.1     V L P S K A L F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K V I S T E G R R V G I K K A L
gm037471_Glyma1    V L P S K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K I I T T E G R K V G I K K A L
Sm014761_Selmo1    E L P E K A L F G E R E W Y F F S P R D R K Y P N G A R P N R A A A S G Y W K A T G T D K P I L S K G K K V G V K K A L
 
AT3G15500.1     V F Y I G K A P K G T K T N W I M H E Y R L I E P S - - - - - - - - - - R R N G S T K L D D W V L C R I Y K K Q T S A Q
gm037471_Glyma1    V F Y V G K A P K G T K T N W I M H E Y R L L D S S - - - - - - - - - - R K N T G T K L D D W V L C R I Y K K N S S A Q
Sm014761_Selmo1    V F Y K G K A P K G S K T N W I M H E Y R L A D S S A K A A A A I P A M R K K G S L R L D D W V L C R I Y K K S S G A F
 
AT3G15500.1     K Q A Y N N L M T S G R - - E Y S N N G S S T S S S S - - - - - - - H Q Y D D V L E S L H E I D N R S L - - - - - G F A
gm037471_Glyma1    K T A Q N G V V P S N E H T Q Y S - N G S S S S S S S - - - - - - - - Q L E D V L E S L P S I D E R C - - - - - - - F A
Sm014761_Selmo1    K P M L - - - - - - - - - - - - - - S G S T T P R S S M K S E P P E E E L D D V L A S L P D I D D N S R L Y K I P P F G
 
AT3G15500.1     A G S S N A L P H S H R P - - - - V L T N H K T G F Q G L A R E P S F D W A N L I G Q N S V P E L G L S H N - - - - - -
gm037471_Glyma1    M P R V N T L Q Q Q Q H - - - - - - - H E E K V N V Q N L G A G G L M D W T N P S V L N S V A D F A S G N N Q V V Q D Q
Sm014761_Selmo1    S S S P P P P P R R G R A W N S R T R T T S G V R A D R P S R G P S R D - - - - - - - - - - - - - - - - - - - - - - - -
 
AT3G15500.1     - - - - - - - - - - - - - V P S I R Y G D - - - - - - - - - - - - G G T Q Q Q T E G I P R F N N N S D V S A N - - - Q G
gm037471_Glyma1    T Q G M V N Y N C N D L Y V P T L C H L D S S V P L K M E E E V Q S G V R N Q R V G - - - - N N N S W F L Q N D F T Q G
Sm014761_Selmo1    - - - - - - - - - - - - - L P T I C - - - - - - P - - - - - - - - - - - - - - - - - - P R - C S T R D L L A R - - - - -
 
AT3G15500.1     F - - S V D P V N G F G Y S G Q Q S S G F - - G F I - - - - - -
gm037471_Glyma1    F Q N S V D T C - G F K Y P - V Q P V G F - - G F R N - - - - -
Sm014761_Selmo1    - - - - - - - - - - - - - - - R R P S H F L L G E R S V E N R C
 
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