fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT3G15500.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt025675 not found in 342aa AT4G27410.2 1st_not 0.583471074 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT3G15500.1     MGLQELDPLAQLSLPPGFRFYPTDEELMVEYLCRKAAGHDFSLQLIAEIDLYKFDPWVLP
pt025675_POPTR_ MGLQETDPLAQLSLPPGFRFHPTDEELLVQYLCKKVAGHHFSLQIIGEIDLYKFDPWFLP
                ***** **************:******:*:***:*.***.****:*.**********.**

AT3G15500.1     SKALFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVISTEGRRVGIKKALVFY
pt025675_POPTR_ GKAIFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITTEGRKVGIKKALVFY
                .**:****************************************:****:**********

AT3G15500.1     IGKAPKGTKTNWIMHEYRLIEPSRRNGSTKLDDWVLCRIYKKQTSAQKQAYNNLMTSGRE
pt025675_POPTR_ VGKAPKGTKTNWIMHEYRLLESSRKSGSTKLDEWVLCRIYKKNSSAAQKSMSSV--SSKE
                :******************:*.**:.******:*********::** ::: ..:  *.:*

AT3G15500.1     YSNNGSSTSSSSHQYDDVLESLHEIDNRSLGFAAGSSNALP---HSHRPVLTNHKTGFQG
pt025675_POPTR_ YSTNGSCSSSSSH-LEDVLDSLTEIDDRL--FALPRTNSLKQMQHEEKINLANLGSG---
                **.***.:*****  :***:** ***:*   **   :*:*    *..:  *:*  :*   

AT3G15500.1     LAREPSFDWANLIGQNSVPEL-----GLSHN--------VPS------------------
pt025675_POPTR_ -----SFDWATLAGLNSLPELLQTQPGANYSNTNVNGVHVPSMPPLCHADSSTGRMGTSV
                     *****.* * **:***     * .:.        ***                  

AT3G15500.1     -----------IRYGDGGTQQQTEGI--PRFNNNSDVSANQGFSVDPVNGFGYSGQQSSG
pt025675_POPTR_ EEEVQSGVRTQLRDGNSGAFQQNSGVMTPNFSST---------LLDPYE-LRYSTQPGSG
                           :* *:.*: **..*:  *.*...          :** : : ** * .**

AT3G15500.1     FGFI-
pt025675_POPTR_ YGFRQ
                :**
BoxShade v3.31 C (beta, 970507) Output
AT3G15500.1     M G L Q E L D P L A Q L S L P P G F R F Y P T D E E L M V E Y L C R K A A G H D F S L Q L I A E I D L Y K F D P W V L P
pt025675_POPTR_    M G L Q E T D P L A Q L S L P P G F R F H P T D E E L L V Q Y L C K K V A G H H F S L Q I I G E I D L Y K F D P W F L P
 
AT3G15500.1     S K A L F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K V I S T E G R R V G I K K A L V F Y
pt025675_POPTR_    G K A I F G E K E W Y F F S P R D R K Y P N G S R P N R V A G S G Y W K A T G T D K V I T T E G R K V G I K K A L V F Y
 
AT3G15500.1     I G K A P K G T K T N W I M H E Y R L I E P S R R N G S T K L D D W V L C R I Y K K Q T S A Q K Q A Y N N L M T S G R E
pt025675_POPTR_    V G K A P K G T K T N W I M H E Y R L L E S S R K S G S T K L D E W V L C R I Y K K N S S A A Q K S M S S V - - S S K E
 
AT3G15500.1     Y S N N G S S T S S S S H Q Y D D V L E S L H E I D N R S L G F A A G S S N A L P - - - H S H R P V L T N H K T G F Q G
pt025675_POPTR_    Y S T N G S C S S S S S H - L E D V L D S L T E I D D R L - - F A L P R T N S L K Q M Q H E E K I N L A N L G S G - - -
 
AT3G15500.1     L A R E P S F D W A N L I G Q N S V P E L - - - - - G L S H N - - - - - - - - V P S - - - - - - - - - - - - - - - - - -
pt025675_POPTR_    - - - - - S F D W A T L A G L N S L P E L L Q T Q P G A N Y S N T N V N G V H V P S M P P L C H A D S S T G R M G T S V
 
AT3G15500.1     - - - - - - - - - - - I R Y G D G G T Q Q Q T E G I - - P R F N N N S D V S A N Q G F S V D P V N G F G Y S G Q Q S S G
pt025675_POPTR_    E E E V Q S G V R T Q L R D G N S G A F Q Q N S G V M T P N F S S T - - - - - - - - - L L D P Y E - L R Y S T Q P G S G
 
AT3G15500.1     F G F I -
pt025675_POPTR_    Y G F R Q
 
0